CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG02701
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG02701
T301446_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR
YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.780
0.537
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.780
0.537
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.780
0.537
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.780
0.537
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.780
0.537
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG02701
Nuclear receptor
630
696
KMRSVCGDKASGIHYGVMLCEGCKAFRIKSCQTDYACRRVKSCEISRENCICKYCRYQKCLQVGMTK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCOA1
Tupaia belangeri
ENSTBEG00000006393
N
0.000
ENSOARG00000018040
Ovis aries
ENSOARG00000018040
N
0.000
NCOA1
Oryctolagus cuniculus
ENSOCUG00000015422
N
0.000
NCOA1
Otolemur garnettii
ENSOGAG00000000754
N
0.000
ENSPANG00000016229
Papio anubis
ENSPANG00000016229
N
0.000
ENSPPYG00000012598
Pongo abelii
ENSPPYG00000012598
N
0.000
ENSPSIG00000007514
Pelodiscus sinensis
ENSPSIG00000007514
N
0.000
NCOA1
Pan troglodytes
ENSPTRG00000011715
N
0.000
NCOA1
Pteropus vampyrus
ENSPVAG00000017511
N
0.000
Ncoa1
Rattus norvegicus
ENSRNOG00000004068
N
0.000
NCOA1
Sorex araneus
ENSSARG00000014416
N
0.000
ENSSHAG00000003234
Sarcophilus harrisii
ENSSHAG00000003234
N
0.000
NCOA1
Sus scrofa
ENSSSCG00000008581
N
0.000
ENSNLEG00000000895
Nomascus leucogenys
ENSNLEG00000000895
N
0.000
ENSTSYG00000010360
Tarsius syrichta
ENSTSYG00000010360
N
0.000
NCOA1
Tursiops truncatus
ENSTTRG00000015113
N
0.000
Afo_R011828
Aptenodytes forsteri
Afo_R011828
N
0.000
Alligator_sinensis_CCG016737.3
Alligator sinensis
Alligator_sinensis_CCG016737.3
N
0.000
Brh_R012327
Buceros rhinoceros
Brh_R012327
N
0.000
Cmyd_10021484
Chelonia mydas
Cmyd_10021484
N
0.000
ENSP00000320940-D1
Bos grunniens
ENSP00000320940-D1
N
0.000
ENSP00000385216
Macaca fascicularis
ENSP00000385216
N
0.000
Myotis_brandtii_NCOA1_10031247
Myotis brandtii
Myotis_brandtii_NCOA1_10031247
N
0.000
Pvit_14468
Pogona vitticeps
Pvit_14468
N
0.000
ncoa1
Xenopus tropicalis
XB-GENE-494349
N
0.000
ENSFALG00000010745
Ficedula albicollis
ENSFALG00000010745
N
0.000
ENSAMEG00000002653
Ailuropoda melanoleuca
ENSAMEG00000002653
N
0.000
ENSAPLG00000013551
Anas platyrhynchos
ENSAPLG00000013551
N
0.000
NCOA1
Bos taurus
ENSBTAG00000015007
N
0.000
NCOA1
Canis familiaris
ENSCAFG00000004075
N
0.000
NCOA1
Choloepus hoffmanni
ENSCHOG00000004072
N
0.000
NCOA1
Callithrix jacchus
ENSCJAG00000007912
N
0.000
NCOA1
Cavia porcellus
ENSCPOG00000001117
N
0.000
ENSCSAG00000008479
Chlorocebus sabaeus
ENSCSAG00000008479
N
0.000
NCOA1
Dasypus novemcinctus
ENSDNOG00000009924
N
0.000
NCOA1
Erinaceus europaeus
ENSEEUG00000011176
N
0.000
NCOA1
Echinops telfairi
ENSETEG00000013375
N
0.000
NCOA1
Anolis carolinensis
ENSACAG00000000619
N
0.000
NCOA1
Homo sapiens
ENSG00000084676
N
0.000
NCOA1
Gallus gallus
ENSGALG00000016617
N
0.000
NCOA1
Gorilla gorilla
ENSGGOG00000011279
N
0.000
NCOA1
Loxodonta africana
ENSLAFG00000014442
N
0.000
NCOA1
Meleagris gallopavo
ENSMGAG00000014153
N
0.000
ENSMICG00000001567
Microcebus murinus
ENSMICG00000001567
N
0.000
NCOA1
Myotis lucifugus
ENSMLUG00000014119
N
0.000
NCOA1
Macaca mulatta
ENSMMUG00000020838
N
0.000
NCOA1
Monodelphis domestica
ENSMODG00000015907
N
0.000
ENSMPUG00000014013
Mustela putorius furo
ENSMPUG00000014013
N
0.000
Ncoa1
Mus musculus
ENSMUSG00000020647
N
0.000