CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG06614
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG06614
T301487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-177
M02419_2.00
Caenorhabditis elegans
TCGRGANY
RNTCYCGA
PBM
Weirauch et al.(2014)
pTH9044
0.965
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG06614
Nuclear receptor
31
103
EECKICFQQGHGYHFGVFTCRACAAFFRRCHFSSIIEQRKCRLMNGNCGPNKNGRWFCKKCRLIKCLESGMTT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017208
Oryza indica
BGIOSGA017208
N
0.000
OBART04G25140
Oryza barthii
OBART04G25140
N
0.000
OGLUM04G26680
Oryza glumaepatula
OGLUM04G26680
N
0.000
ONIVA03G13630
Oryza nivara
ONIVA03G13630
N
0.000
ORGLA04G0217100
Oryza glaberrima
ORGLA04G0217100
N
0.000
ORUFI04G28400
Oryza rufipogon
ORUFI04G28400
N
0.000
TGAL6
Oryza sativa
OS04G0637000
N
0.000