CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG13574
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG13574
T301532_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-122
M00696_2.00
Caenorhabditis elegans
NDTGGAGTVN
NBACTCCAHN
PBM
Narasimhan et al.(2015)
pTH9326
0.969
0.714
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG13574
Nuclear receptor
5
77
KPCLVCNSPGNGLHFGIEACRGCTSFFRRTVVQDKTYDCNGDESCEIGNIHIAMSQKCRKCRFSKCLEAGMRS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-122
Caenorhabditis elegans
WBGene00003712
D
0.969
CBG11680
Caenorhabditis briggsae
CBG11680
I
0.853
CBN06713
Caenorhabditis brenneri
CBN06713
I
0.980
CRE13721
Caenorhabditis remanei
CRE13721
I
0.896
CRE20001
Caenorhabditis remanei
CRE20001
I
0.825
nhr-104
Caenorhabditis elegans
WBGene00003694
I
0.934
SMUV_0000721901
Syphacia muris
SMUV_0000721901
I
0.796
PTRK_0000573200
Parastrongyloides trichosuri
PTRK_0000573200
N
0.749
SSTP_0000133400
Strongyloides stercoralis
SSTP_0000133400
N
0.762
SVE_1744300
Strongyloides venezuelensis
SVE_1744300
N
0.761