CBG23319 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG23319 T301620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.939 0.671
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.922 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG23319 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10010825m.g Citrus clementina Ciclev10010825m.g N
PK11483.1 Cannabis sativa PK11483.1 N
orange1.1g009607m.g Citrus sinensis orange1.1g009607m.g N
MDP0000825698 Malus domestica MDP0000825698 N
Lus10033060.g Linum usitatissimum Lus10033060.g N
Lus10017758.g Linum usitatissimum Lus10017758.g N
Gorai.010G067000 Gossypium raimondii Gorai.010G067000 N
Gorai.009G021700 Gossypium raimondii Gorai.009G021700 N
gene30958-v1.0-hybrid Fragaria vesca gene30958-v1.0-hybrid N
evm.TU.supercontig_75.88 Carica papaya evm.TU.supercontig_75.88 N
Eucgr.C04156 Eucalyptus grandis Eucgr.C04156 N
GLYMA04G21340 Glycine max GLYMA04G21340 N
Aquca_001_00705 Aquilegia coerulea Aquca_001_00705 N
Cucsa.082270 Cucumis sativus Cucsa.082270 N
29807.m000482 Ricinus communis 29807.m000482 N
Cla012500 Citrullus lanatus Cla012500 N
Ca_24417 Cicer arietinum Ca_24417 N
VIT_11s0016g04630 Vitis vinifera VIT_11s0016g04630 N
TCM_037975 Theobroma cacao TCM_037975 N
PRUPE_ppa003975mg Prunus persica PRUPE_ppa003975mg N
GLYMA20G34260 Glycine max GLYMA20G34260 N
GLYMA06G23940 Glycine max GLYMA06G23940 N