CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN26258
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN26258
T301843_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.983
0.929
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN26258
Nuclear receptor
7
77
RICAVCGDAPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKSCEVNKYERNTCRYCRFRKCLLVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TMUE_s0001003000
Trichuris muris
TMUE_s0001003000
N
TMUE_s0018011000
Trichuris muris
TMUE_s0018011000
N
TMUE_s0038005900
Trichuris muris
TMUE_s0038005900
N
TMUE_s0065003800
Trichuris muris
TMUE_s0065003800
N