ENSCSAVG00000008466 (Ciona savignyi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSCSAVG00000008466 T302843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSPMAG00000000180
M02403_2.00 		Petromyzon marinus
RGKWCRN
NYGWMCY		 PBM
Weirauch et al.(2014)
pTH5509 		0.932 0.614
VDR
M03363_2.00 		Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC		 SELEX
Jolma et al.(2013)
VDR_1 		0.929 0.600
Vdr
M03429_2.00 		Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY		 SELEX
Jolma et al.(2013)
Vdr_1 		0.929 0.600
VDR
M05877_2.00 		Homo sapiens
HRRGTTCA
TGAACYYD		 SMiLE-seq
Isakova et al.(2017)
VDR 		0.929 0.600
VDR
M09269_2.00 		Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A 		0.929 0.600
Vdr
M09315_2.00 		Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A 		0.929 0.600
VDR
M09606_2.00 		Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN		 Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484 		0.929 0.600
VDR
M11116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q3 		0.929 0.600
VDR
M11117_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6_01 		0.929 0.600
VDR
M11118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6 		0.929 0.600
NR1I2
M03925_2.00 		Homo sapiens
RGKKCRNNVRGKKCR
YGMMCYBNNYGMMCY		 SELEX
Nitta et al.(2015)
NR1I2_1 		0.858 0.557
NR1I2
M05625_2.00 		Homo sapiens
VRGTTCRNNSRGKTCRH
DYGAMCYSNNYGAACYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX 		0.858 0.557
NR1I2
M09283_2.00 		Homo sapiens
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C 		0.858 0.557
NR1I2
M05626_2.00 		Homo sapiens
VRGKKCRNNVRGKKCRN
NYGMMCYBNNYGMMCYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX 		0.858 0.557
ENSGALG00000028624
M02398_2.00 		Gallus gallus
GRGKTCAH
DTGAMCYC		 PBM
Weirauch et al.(2014)
pTH6492 		0.818 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000014468 Nuclear receptor 33 102

Links

Other Nuclear receptor family TFs
Other Ciona savignyi TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACUA019142 Anopheles culicifacies ACUA019142 I
CpipJ_CPIJ016958 Culex pipiens CpipJ_CPIJ016958 I
PHUM083480 Pediculus humanus PHUM083480 I
SPU_027969 Strongylocentrotus purpuratus SPU_027969 I
YQE_06872 Dendroctonus ponderosae YQE_06872 I
AALB009484 Anopheles albimanus AALB009484 I
AARA004720 Anopheles arabiensis AARA004720 I
AATE008326 Anopheles atroparvus AATE008326 I
ACHR000066 Anopheles christyi ACHR000066 I
ACOM037496 Anopheles coluzzii ACOM037496 I
MCINX001888 Melitaea cinxia MCINX001888 I
ADIR002760 Anopheles dirus ADIR002760 I
AFAF012594 Anopheles farauti AFAF012594 I
AFUN009863 Anopheles funestus AFUN009863 I
AMEC017755 Anopheles melas AMEC017755 I
AMEM004834 Anopheles merus AMEM004834 I
AMIN000724 Anopheles minimus AMIN000724 I
AQUA009304 Anopheles quadriannulatus AQUA009304 I
ASTEI00078 Anopheles stephensi ASTEI00078 I
ACYPI55143 Acyrthosiphon pisum ACYPI55143 I
AGAP002903 Anopheles gambiae AGAP002903 I
BGIBMGA005669 Bombyx mori BGIBMGA005669 I
CPIJ016958 Culex quinquefasciatus CPIJ016958 I
ENSACAG00000004870 Anolis carolinensis ENSACAG00000004870 I
ENSONIG00000019769 Oreochromis niloticus ENSONIG00000019769 I
ENSPFOG00000004597 Poecilia formosa ENSPFOG00000004597 I
foxj1b Takifugu rubripes ENSTRUG00000016940 I
HMEL002016 Heliconius melpomene HMEL002016 I
GG16378 Drosophila erecta FBgn0108610 N
CG32006 Drosophila melanogaster FBgn0052006 N
GH23950 Drosophila grimshawi FBgn0131407 N
GI14030 Drosophila mojavensis FBgn0136784 N
GL18393 Drosophila persimilis FBgn0155994 N
GM23241 Drosophila sechellia FBgn0178108 N
LCUP016770 Lucilia cuprina LCUP016770 N
GJ19567 Drosophila virilis FBgn0206709 N
GK13616 Drosophila willistoni FBgn0215624 N
GE14537 Drosophila yakuba FBgn0232137 N