CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NR1H3
(
Erinaceus europaeus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSEEUG00000003283
T303048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR1H3
M09264_2.00
Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
0.989
0.986
Nr1h3
M09301_2.00
Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
0.987
0.986
nr1h5.S
M11194_2.00
Xenopus laevis
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRIR1_Q6
0.966
0.729
Nr1h2
M09620_2.00
Mus musculus
RGGTYACTNNAGGTCA
TGACCTNNAGTRACCY
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
0.962
0.771
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN
NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.957
0.714
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.957
0.714
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN
NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.957
0.714
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.957
0.714
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.957
0.714
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.957
0.714
NR1H4
M11086_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.957
0.714
NR1H4
M11087_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.957
0.714
NR1H4
M11088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.957
0.714
NR1H4
M11089_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.957
0.714
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.957
0.700
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW
WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.949
0.714
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN
NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.888
0.571
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR
YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.885
0.514
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.885
0.514
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.885
0.514
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.885
0.514
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.885
0.514
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.885
0.514
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.885
0.514
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.885
0.514
NR2F6
M11153_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.885
0.514
NR2F6
M11154_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.885
0.514
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.885
0.514
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.885
0.514
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.885
0.514
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.885
0.514
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.879
0.600
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.873
0.557
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN
NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.873
0.557
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.873
0.557
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.873
0.557
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.873
0.557
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.873
0.557
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.873
0.557
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA
TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.873
0.557
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.873
0.557
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.873
0.557
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.873
0.557
NR2C2
M11173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.873
0.557
NR2C2
M11174_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.873
0.557
NR2C2
M11175_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.873
0.557
NR2C2
M11176_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.873
0.557
NR2C2
M11177_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.873
0.557
NR2C2
M11178_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.873
0.557
NR2C2
M11179_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.873
0.557
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN
NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.873
0.557
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.867
0.500
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN
NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.867
0.514
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN
NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.867
0.514
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA
TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.867
0.514
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB
VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.867
0.514
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.867
0.514
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.867
0.514
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.867
0.514
NR2F2
M11181_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.867
0.514
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN
NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.864
0.514
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN
NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.864
0.514
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.864
0.514
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.864
0.514
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN
NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.864
0.514
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.864
0.514
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.864
0.514
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.864
0.514
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.864
0.514
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.864
0.514
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.864
0.514
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA
TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.864
0.514
NR2F1
M11172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.864
0.514
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.864
0.514
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.864
0.514
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.864
0.514
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.864
0.514
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN
NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.861
0.529
Rorb
M00820_2.00
Mus musculus
NRGGTCANN
NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.861
0.514
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.861
0.514
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.861
0.514
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.861
0.514
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.861
0.514
RORB
M11187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.861
0.514
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.861
0.514
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.861
0.514
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.858
0.529
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.858
0.529
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.858
0.529
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.858
0.529
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.858
0.529
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.858
0.529
Rora
M00819_2.00
Mus musculus
NNRGGTCA
TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.858
0.514
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.858
0.514
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.858
0.514
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA
TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.858
0.514
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.858
0.514
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.858
0.514
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.858
0.514
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.858
0.514
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.858
0.514
RORA
M11092_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.858
0.514
RORA
M11093_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.858
0.514
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA
TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.858
0.514
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.839
0.500
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.839
0.500
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.839
0.500
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.837
0.514
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA
TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.837
0.514
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.835
0.514
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR
YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.834
0.514
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.834
0.514
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.834
0.514
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.834
0.514
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.834
0.514
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.829
0.500
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.829
0.500
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.829
0.500
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.829
0.500
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.829
0.500
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.829
0.500
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.829
0.500
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.829
0.500
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.826
0.557
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.826
0.557
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.826
0.557
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA
TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.822
0.557
RARG
M02397_2.00
Homo sapiens
VGGTCANN
NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.821
0.529
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN
NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.821
0.529
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.821
0.529
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.821
0.529
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.821
0.529
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.821
0.529
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.821
0.529
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.821
0.529
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.821
0.529
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.821
0.529
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.821
0.529
RARG
M05653_2.00
Homo sapiens
NRGGTCANV
BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.821
0.529
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.821
0.529
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.821
0.529
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.821
0.529
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.821
0.529
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.821
0.529
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.821
0.529
RARG
M11167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.821
0.529
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV
BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.821
0.529
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.821
0.529
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.821
0.529
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH
DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.815
0.514
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH
DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.809
0.514
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA
TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.806
0.543
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN
NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.789
0.514
Rara
M00185_2.00
Mus musculus
NRGGTCAN
NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.789
0.514
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.789
0.514
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.789
0.514
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.789
0.514
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.789
0.514
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.789
0.514
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.789
0.514
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.789
0.514
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.789
0.514
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.789
0.514
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.789
0.514
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.789
0.514
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.789
0.514
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.789
0.514
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.789
0.514
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.789
0.514
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV
BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.789
0.514
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN
NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.789
0.514
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.789
0.514
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.789
0.514
RARA
M05878_2.00
Homo sapiens
RAGGTCA
TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.789
0.514
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.789
0.514
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.789
0.514
RARA
M11137_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.789
0.514
RARB
M11094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.789
0.514
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.789
0.514
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.789
0.514
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN
NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.789
0.514
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH
DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.789
0.514
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.789
0.514
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.789
0.514
Esr1
M00813_2.00
Mus musculus
NRKGTCANNN
NNNTGACMYN
PBM
Weirauch et al.(2013)
pTH3510
0.771
0.500
ESR1
M03356_2.00
Homo sapiens
NRGGTCAMVRTGACCTK
MAGGTCAYBKTGACCYN
SELEX
Jolma et al.(2013)
ESR1_1
0.771
0.500
ESR1
M05569_2.00
Homo sapiens
NAGGTCAYSRTGACCTN
NAGGTCAYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX
0.771
0.500
ESR1
M05571_2.00
Homo sapiens
NRGGTCANSNTGACCYN
NRGGTCANSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX
0.771
0.500
ESR1
M07985_2.00
Homo sapiens
DNBYMAAGGTCANN
NNTGACCTTKRVNH
ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford
0.771
0.500
ESR1
M08217_2.00
Homo sapiens
NHNRGGTCANNNTGNCCY
RGGNCANNNTGACCYNDN
ChIP-seq
Contrino et al.(2012)
Mv66
0.771
0.500
ESR1
M08218_2.00
Homo sapiens
CCAAGGTCAS
STGACCTTGG
ChIP-seq
Contrino et al.(2012)
Mv67
0.771
0.500
ESR1
M09267_2.00
Homo sapiens
RGGKCABMNTGMCCY
RGGKCANKVTGMCCY
Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A
0.771
0.500
Esr1
M09309_2.00
Mus musculus
RGGDCABKSTGWCCY
RGGWCASMVTGHCCY
Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A
0.771
0.500
ESR1
M09604_2.00
Homo sapiens
NRGGTCANNNTGACC
GGTCANNNTGACCYN
Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished
0.771
0.500
ESR1
M11098_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_01
0.771
0.500
ESR1
M11099_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q4
0.771
0.500
ESR1
M11100_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01
0.771
0.500
ESR1
M11101_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02
0.771
0.500
ESR1
M11102_2.00
Homo sapiens
NHRGGTCAVNNHNNHYBNN
NNVRDNNDNNBTGACCYDN
Transfac
Matys et al.(2006)
V$ER_Q6
0.771
0.500
ESR1
M11103_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_04
0.771
0.500
ESR1
M11104_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_05
0.771
0.500
ESR1
M05570_2.00
Homo sapiens
NAGGTCAYSRYGACCTH
DAGGTCRYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX
0.771
0.500
ESR1
M05572_2.00
Homo sapiens
NRGGTCANSBYGACCYN
NRGGTCRVSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX
0.771
0.500
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN
NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.762
0.557
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH
DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.762
0.557
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH
DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.762
0.557
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.762
0.557
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN
NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.762
0.557
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.762
0.557
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH
DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.762
0.557
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA
TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.762
0.557
THRB
M11150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.762
0.557
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN
NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.762
0.557
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN
NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.762
0.557
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.762
0.557
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH
DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.762
0.557
Esr2
M01297_2.00
Mus musculus
NNRGGTCAH
DTGACCYNN
PBM
Lambert et al.(2019)
pTH3511
0.759
0.500
ESR2
M08154_2.00
Homo sapiens
RGGTCASNNWGNCCY
RGGNCWNNSTGACCY
ChIP-seq
Mathelier et al.(2014)
MA0258.2
0.759
0.500
ESR2
M09279_2.00
Homo sapiens
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
0.759
0.500
Esr2
M09311_2.00
Mus musculus
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
0.759
0.500
ESR2
M11146_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
0.759
0.500
ESR2
M11147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5
0.759
0.500
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000003000
Nuclear receptor
96
165
ELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMRE
Links
Other
Nuclear receptor
family TFs
Other
Erinaceus europaeus
TFs
1868 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
IRX1
Homo sapiens
ENSG00000170549
D
IRX3
Homo sapiens
ENSG00000177508
D
Irx3
Mus musculus
ENSMUSG00000031734
D
mirr
Drosophila melanogaster
FBgn0014343
D
SNAPOd2T00005194001
Oikopleura dioica
SNAPOd2T00005194001
D
CpipJ_CPIJ000127
Culex pipiens
CpipJ_CPIJ000127
I
AAEL007502
Aedes aegypti
AAEL007502
I
ACEP21480
Atta cephalotes
ACEP21480
I
ACYPI009852
Acyrthosiphon pisum
ACYPI009852
I
ADAC004937
Anopheles darlingi
ADAC004937
I
AGAP005011
Anopheles gambiae
AGAP005011
I
BGIBMGA000639
Bombyx mori
BGIBMGA000639
I
CGI_10020098
Crassostrea gigas
CGI_10020098
I
CPIJ000127
Culex quinquefasciatus
CPIJ000127
I
DAPPUDRAFT_28797
Daphnia pulex
DAPPUDRAFT_28797
I
IRX1
Anolis carolinensis
ENSACAG00000023038
I
ENSAMEG00000001629
Ailuropoda melanoleuca
ENSAMEG00000001629
I
ENSAMEG00000016409
Ailuropoda melanoleuca
ENSAMEG00000016409
I
ENSAMEG00000016415
Ailuropoda melanoleuca
ENSAMEG00000016415
I
ENSAMXG00000005714
Astyanax mexicanus
ENSAMXG00000005714
I
ENSAMXG00000012619
Astyanax mexicanus
ENSAMXG00000012619
I
ENSAMXG00000017707
Astyanax mexicanus
ENSAMXG00000017707
I
ENSAPLG00000000571
Anas platyrhynchos
ENSAPLG00000000571
I
ENSAPLG00000014347
Anas platyrhynchos
ENSAPLG00000014347
I
IRX1
Bos taurus
ENSBTAG00000000809
I
IRX3
Bos taurus
ENSBTAG00000012083
I
IRX6
Bos taurus
ENSBTAG00000016407
I
IRX6
Canis familiaris
ENSCAFG00000009430
I
IRX3
Canis familiaris
ENSCAFG00000032579
I
irx-a
Ciona intestinalis
ENSCING00000018956
I
irx-b
Ciona intestinalis
ENSCING00000021438
I
IRX3
Callithrix jacchus
ENSCJAG00000001418
I
IRX1
Callithrix jacchus
ENSCJAG00000008552
I
IRX4
Callithrix jacchus
ENSCJAG00000009376
I
IRX6
Callithrix jacchus
ENSCJAG00000012962
I
ENSCPOG00000008794
Cavia porcellus
ENSCPOG00000008794
I
IRX6
Cavia porcellus
ENSCPOG00000013677
I
IRX1
Cavia porcellus
ENSCPOG00000021147
I
ENSCSAG00000005285
Chlorocebus sabaeus
ENSCSAG00000005285
I
ENSCSAG00000005290
Chlorocebus sabaeus
ENSCSAG00000005290
I
ENSCSAG00000017349
Chlorocebus sabaeus
ENSCSAG00000017349
I
ENSCSAVG00000005011
Ciona savignyi
ENSCSAVG00000005011
I
ENSCSAVG00000005021
Ciona savignyi
ENSCSAVG00000005021
I
ENSCSAVG00000009804
Ciona savignyi
ENSCSAVG00000009804
I
irx7
Danio rerio
ENSDARG00000002601
I
irx3b
Danio rerio
ENSDARG00000031138
I
irx1b
Danio rerio
ENSDARG00000056594
I
irx3a
Danio rerio
ENSDARG00000101076
I
irx1a
Danio rerio
ENSDARG00000101831
I
IRX1
Dasypus novemcinctus
ENSDNOG00000002056
I
IRX6
Dasypus novemcinctus
ENSDNOG00000012614
I
ENSDORG00000003187
Dipodomys ordii
ENSDORG00000003187
I
Irx3
Dipodomys ordii
ENSDORG00000011798
I
Irx6
Dipodomys ordii
ENSDORG00000012265
I
Irx4
Dipodomys ordii
ENSDORG00000015537
I
IRX1
Equus caballus
ENSECAG00000015273
I
IRX3
Equus caballus
ENSECAG00000023496
I
IRX6
Equus caballus
ENSECAG00000023569
I
IRX6
Erinaceus europaeus
ENSEEUG00000006088
I
IRX1
Echinops telfairi
ENSETEG00000004419
I
IRX6
Echinops telfairi
ENSETEG00000020207
I
IRX3
Echinops telfairi
ENSETEG00000020300
I
ENSFALG00000005225
Ficedula albicollis
ENSFALG00000005225
I
IRX6
Felis catus
ENSFCAG00000013031
I
IRX6
Homo sapiens
ENSG00000159387
I
irx1a
Gasterosteus aculeatus
ENSGACG00000006572
I
irx1b
Gasterosteus aculeatus
ENSGACG00000009006
I
irx4b
Gasterosteus aculeatus
ENSGACG00000009012
I
irx3a
Gasterosteus aculeatus
ENSGACG00000016682
I
ENSGALG00000013194
Gallus gallus
ENSGALG00000013194
I
IRX6
Gorilla gorilla
ENSGGOG00000004496
I
IRX3
Gorilla gorilla
ENSGGOG00000014067
I
ENSGGOG00000025373
Gorilla gorilla
ENSGGOG00000025373
I
ENSGGOG00000027210
Gorilla gorilla
ENSGGOG00000027210
I
ENSGMOG00000003183
Gadus morhua
ENSGMOG00000003183
I
ENSGMOG00000003206
Gadus morhua
ENSGMOG00000003206
I
ENSGMOG00000004053
Gadus morhua
ENSGMOG00000004053
I
ENSGMOG00000005998
Gadus morhua
ENSGMOG00000005998
I
ENSGMOG00000006669
Gadus morhua
ENSGMOG00000006669
I
ENSLACG00000011795
Latimeria chalumnae
ENSLACG00000011795
I
ENSLACG00000012956
Latimeria chalumnae
ENSLACG00000012956
I
IRX3
Loxodonta africana
ENSLAFG00000010498
I
IRX1
Loxodonta africana
ENSLAFG00000012017
I
IRX6
Loxodonta africana
ENSLAFG00000031625
I
ENSLOCG00000007127
Lepisosteus oculatus
ENSLOCG00000007127
I
ENSLOCG00000008834
Lepisosteus oculatus
ENSLOCG00000008834
I
IRX6
Microcebus murinus
ENSMICG00000003780
I
IRX1
Microcebus murinus
ENSMICG00000011730
I
IRX3
Microcebus murinus
ENSMICG00000016860
I
ENSMLUG00000004452
Myotis lucifugus
ENSMLUG00000004452
I
ENSMLUG00000029912
Myotis lucifugus
ENSMLUG00000029912
I
IRX3
Macaca mulatta
ENSMMUG00000001389
I
IRX1
Macaca mulatta
ENSMMUG00000002613
I
IRX6
Macaca mulatta
ENSMMUG00000011658
I
IRX1
Monodelphis domestica
ENSMODG00000001451
I
IRX3
Monodelphis domestica
ENSMODG00000013192
I
ENSMPUG00000003361
Mustela putorius furo
ENSMPUG00000003361
I
ENSMPUG00000003378
Mustela putorius furo
ENSMPUG00000003378
I
Irx1
Mus musculus
ENSMUSG00000060969
I
ENSNLEG00000001184
Nomascus leucogenys
ENSNLEG00000001184
I
ENSNLEG00000001193
Nomascus leucogenys
ENSNLEG00000001193
I
IRX1
Ornithorhynchus anatinus
ENSOANG00000001749
I
ENSOARG00000005781
Ovis aries
ENSOARG00000005781
I
ENSOARG00000016170
Ovis aries
ENSOARG00000016170
I
ENSOARG00000017964
Ovis aries
ENSOARG00000017964
I
ENSOARG00000018027
Ovis aries
ENSOARG00000018027
I
ENSOCUG00000004079
Oryctolagus cuniculus
ENSOCUG00000004079
I
IRX1
Oryctolagus cuniculus
ENSOCUG00000024264
I
IRX1
Otolemur garnettii
ENSOGAG00000024732
I
IRX6
Otolemur garnettii
ENSOGAG00000026649
I
IRX3
Otolemur garnettii
ENSOGAG00000029236
I
ENSONIG00000002808
Oreochromis niloticus
ENSONIG00000002808
I
ENSONIG00000007113
Oreochromis niloticus
ENSONIG00000007113
I
ENSONIG00000007749
Oreochromis niloticus
ENSONIG00000007749
I
ENSONIG00000007752
Oreochromis niloticus
ENSONIG00000007752
I
IRX6
Ochotona princeps
ENSOPRG00000002670
I
ENSOPRG00000003326
Ochotona princeps
ENSOPRG00000003326
I
ENSOPRG00000009909
Ochotona princeps
ENSOPRG00000009909
I
irx1a
Oryzias latipes
ENSORLG00000005157
I
irx3a
Oryzias latipes
ENSORLG00000013724
I
irx4b
Oryzias latipes
ENSORLG00000014288
I
irx1b
Oryzias latipes
ENSORLG00000014300
I
ENSPANG00000009026
Papio anubis
ENSPANG00000009026
I
ENSPANG00000019076
Papio anubis
ENSPANG00000019076
I
ENSPANG00000024570
Papio anubis
ENSPANG00000024570
I
IRX1
Procavia capensis
ENSPCAG00000003248
I
IRX3
Procavia capensis
ENSPCAG00000007496
I
IRX6
Procavia capensis
ENSPCAG00000010505
I
ENSPFOG00000004594
Poecilia formosa
ENSPFOG00000004594
I
ENSPFOG00000004692
Poecilia formosa
ENSPFOG00000004692
I
ENSPFOG00000016005
Poecilia formosa
ENSPFOG00000016005
I
ENSPFOG00000016622
Poecilia formosa
ENSPFOG00000016622
I
ENSPPYG00000007354
Pongo abelii
ENSPPYG00000007354
I
ENSPPYG00000007356
Pongo abelii
ENSPPYG00000007356
I
ENSPPYG00000015327
Pongo abelii
ENSPPYG00000015327
I
ENSPSIG00000006981
Pelodiscus sinensis
ENSPSIG00000006981
I
ENSPSIG00000016915
Pelodiscus sinensis
ENSPSIG00000016915
I
IRX3
Pan troglodytes
ENSPTRG00000008120
I
IRX6
Pan troglodytes
ENSPTRG00000008122
I
IRX1
Pan troglodytes
ENSPTRG00000016709
I
IRX6
Pteropus vampyrus
ENSPVAG00000001061
I
IRX3
Pteropus vampyrus
ENSPVAG00000015986
I
Irx1
Rattus norvegicus
ENSRNOG00000033609
I
IRX6
Sorex araneus
ENSSARG00000009535
I
ENSSHAG00000012619
Sarcophilus harrisii
ENSSHAG00000012619
I
ENSSHAG00000013463
Sarcophilus harrisii
ENSSHAG00000013463
I
IRX6
Sus scrofa
ENSSSCG00000002830
I
IRX3
Sus scrofa
ENSSSCG00000002831
I
ENSSTOG00000015121
Ictidomys tridecemlineatus
ENSSTOG00000015121
I
ENSSTOG00000019902
Ictidomys tridecemlineatus
ENSSTOG00000019902
I
ENSSTOG00000020840
Ictidomys tridecemlineatus
ENSSTOG00000020840
I
IRX3
Tupaia belangeri
ENSTBEG00000008254
I
IRX6
Tupaia belangeri
ENSTBEG00000012638
I
IRX1
Taeniopygia guttata
ENSTGUG00000008517
I
irx1b
Tetraodon nigroviridis
ENSTNIG00000009262
I
irx4b
Tetraodon nigroviridis
ENSTNIG00000009263
I
irx3a
Tetraodon nigroviridis
ENSTNIG00000019841
I
irx1a
Takifugu rubripes
ENSTRUG00000007467
I
irx3a
Takifugu rubripes
ENSTRUG00000009992
I
irx4b
Takifugu rubripes
ENSTRUG00000011559
I
irx1b
Takifugu rubripes
ENSTRUG00000011683
I
IRX6
Tursiops truncatus
ENSTTRG00000001179
I
IRX1
Tursiops truncatus
ENSTTRG00000015625
I
ENSXMAG00000013620
Xiphophorus maculatus
ENSXMAG00000013620
I
ENSXMAG00000013858
Xiphophorus maculatus
ENSXMAG00000013858
I
ENSXMAG00000016177
Xiphophorus maculatus
ENSXMAG00000016177
I
GA10430
Drosophila pseudoobscura
FBgn0070487
I
GF24692
Drosophila ananassae
FBgn0101685
I
GG15588
Drosophila erecta
FBgn0107834
I
GH14720
Drosophila grimshawi
FBgn0122196
I
GI12266
Drosophila mojavensis
FBgn0135023
I
GL25205
Drosophila persimilis
FBgn0162789
I
GM25364
Drosophila sechellia
FBgn0180222
I
GD14396
Drosophila simulans
FBgn0186079
I
GJ11496
Drosophila virilis
FBgn0198754
I
GK25452
Drosophila willistoni
FBgn0227411
I
GE21915
Drosophila yakuba
FBgn0239153
I
ISCW015737
Ixodes scapularis
ISCW015737
I
KGM_15165
Danaus plexippus
KGM_15165
I
L798_06793
Zootermopsis nevadensis
L798_06793
I
LotgiG70106
Lottia gigantea
LotgiG70106
I
MCINX000509
Melitaea cinxia
MCINX000509
I
MESCA004985
Megaselia scalaris
MESCA004985
I
NV13311
Nasonia vitripennis
NV13311
I
PHUM562470
Pediculus humanus
PHUM562470
I
SMAR007692
Strigamia maritima
SMAR007692
I
Smp_134430
Schistosoma mansoni
Smp_134430
I
Smp_202880
Schistosoma mansoni
Smp_202880
I
TC003634
Tribolium castaneum
TC003634
I
tetur05g03270
Tetranychus urticae
tetur05g03270
I
WBGene00238427
Onchocerca volvulus
WBGene00238427
I
YQE_07794
Dendroctonus ponderosae
YQE_07794
I
Aan_R002771
Calypte anna
Aan_R002771
I
Aan_R003872
Calypte anna
Aan_R003872
I
Afo_R009185
Aptenodytes forsteri
Afo_R009185
I
Alligator_sinensis_CCG002846.1
Alligator sinensis
Alligator_sinensis_CCG002846.1
I
Alligator_sinensis_CCG006640.1
Alligator sinensis
Alligator_sinensis_CCG006640.1
I
Cflo_05547--XP_396291.2_APIME
Camponotus floridanus
Cflo_05547--XP_396291.2_APIME
I
Cmyd_10006302
Chelonia mydas
Cmyd_10006302
I
ENSBTAP00000001070-D1
Bos grunniens
ENSBTAP00000001070-D1
I
ENSBTAP00000016022-D1
Bos grunniens
ENSBTAP00000016022-D1
I
ENSBTAP00000021815-D1
Bos grunniens
ENSBTAP00000021815-D1
I
ENSMMUP00000001856
Macaca fascicularis
ENSMMUP00000001856
I
ENSP00000290552
Macaca fascicularis
ENSP00000290552
I
ENSP00000305244
Macaca fascicularis
ENSP00000305244
I
Gfo_R006175
Geospiza fortis
Gfo_R006175
I
Gfo_R015931
Geospiza fortis
Gfo_R015931
I
Hsal_07615--XP_396291.2_APIME
Harpegnathos saltator
Hsal_07615--XP_396291.2_APIME
I
Myotis_brandtii_IRX6_10004756
Myotis brandtii
Myotis_brandtii_IRX6_10004756
I
Pvit_14759
Pogona vitticeps
Pvit_14759
I
Tal_R006144
Tyto alba
Tal_R006144
I
e_gw.632.12.1
Branchiostoma floridae
e_gw.632.12.1
I
estExt_fgenesh2_pg.C_900128
Branchiostoma floridae
estExt_fgenesh2_pg.C_900128
I
AAI67543
Xenopus tropicalis
AAI67543
I
AAT72003
Xenopus tropicalis
AAT72003
I
CLEC025077
Cimex lectularius
CLEC025077
I
HHAL007380-PA
Halyomorpha halys
HHAL007380-PA
I
LCUP011928
Lucilia cuprina
LCUP011928
I
LDEC000201
Leptinotarsa decemlineata
LDEC000201
I
Sjc_0111220
Schistosoma japonicum
Sjc_0111220
I
SMU15004107
Schmidtea mediterranea
SMU15004107
I
SNAPOd2T00008264001
Oikopleura dioica
SNAPOd2T00008264001
I
SNAPOd2T00016055001
Oikopleura dioica
SNAPOd2T00016055001
I
irx3
Xenopus tropicalis
XB-GENE-480486
I
irx3.L
Xenopus laevis
XB-GENE-480490
I
irx1.S
Xenopus laevis
XB-GENE-6254076
I
irx4.L
Xenopus laevis
XB-GENE-865388
I
AALB007332
Anopheles albimanus
AALB007332
I
AARA003611
Anopheles arabiensis
AARA003611
I
AATE015341
Anopheles atroparvus
AATE015341
I
ACUA017428
Anopheles culicifacies
ACUA017428
I
ADIR001593
Anopheles dirus
ADIR001593
I
AEPI004234
Anopheles epiroticus
AEPI004234
I
AFAF001223
Anopheles farauti
AFAF001223
I
AFUN004855
Anopheles funestus
AFUN004855
I
AMAM011867
Anopheles maculatus
AMAM011867
I
AMEC013467
Anopheles melas
AMEC013467
I
AMEM014582
Anopheles merus
AMEM014582
I
AMIN011497
Anopheles minimus
AMIN011497
I
AQUA009983
Anopheles quadriannulatus
AQUA009983
I
ASTEI09298
Anopheles stephensi
ASTEI09298
I
BGLB003122
Biomphalaria glabrata
BGLB003122
I
LLOJ001673
Lutzomyia longipalpis
LLOJ001673
I
MDOA001664
Musca domestica
MDOA001664
I
PPAI010023
Phlebotomus papatasi
PPAI010023
I
A_06453
Schistosoma haematobium
A_06453
I
ALUE_0000527301
Ascaris lumbricoides
ALUE_0000527301
I
ASU_05082
Ascaris suum
ASU_05082
I
csin102753
Clonorchis sinensis
csin102753
I
D915_04403
Fasciola hepatica
D915_04403
I
ECANG7_06069
Echinococcus canadensis
ECANG7_06069
I
ECANG7_10531
Echinococcus canadensis
ECANG7_10531
I
ECPE_0000306801
Echinostoma caproni
ECPE_0000306801
I
EmuJ_000898600
Echinococcus multilocularis
EmuJ_000898600
I
EmuJ_001124200
Echinococcus multilocularis
EmuJ_001124200
I
EVEC_0001078001
Enterobius vermicularis
EVEC_0001078001
I
HDID_0000477701
Hymenolepis diminuta
HDID_0000477701
I
HmN_000567900
Hymenolepis microstoma
HmN_000567900
I
L596_g21736
Steinernema carpocapsae
L596_g21736
I
L889_g7575
Steinernema feltiae
L889_g7575
I
L892_g27271
Steinernema scapterisci
L892_g27271
I
L898_g5153
Steinernema monticolum
L898_g5153
I
MCOS_0000001901
Mesocestoides corti
MCOS_0000001901
I
PTRK_0001678200
Parastrongyloides trichosuri
PTRK_0001678200
I
PXEA_0002625101
Protopolystoma xenopodis
PXEA_0002625101
I
SMRZ_0001708201
Schistosoma margrebowiei
SMRZ_0001708201
I
SMTD_0000519501
Schistosoma mattheei
SMTD_0000519501
I
SMUV_0000183501
Syphacia muris
SMUV_0000183501
I
SPAL_0000234400
Strongyloides papillosus
SPAL_0000234400
I
SROB_0000283801
Schistosoma rodhaini
SROB_0000283801
I
SSTP_0000651200
Strongyloides stercoralis
SSTP_0000651200
I
SVE_0475300
Strongyloides venezuelensis
SVE_0475300
I
T265_06818
Opisthorchis viverrini
T265_06818
I
TASK_0000045101
Taenia asiatica
TASK_0000045101
I
TCNE_0001337901
Toxocara canis
TCNE_0001337901
I
TRE_0000216201
Trichobilharzia regenti
TRE_0000216201
I
TRE_0000852301
Trichobilharzia regenti
TRE_0000852301
I
TRE_0001045901
Trichobilharzia regenti
TRE_0001045901
I
TsM_000033600
Taenia solium
TsM_000033600
I
TTAC_0001121301
Hydatigera taeniaeformis
TTAC_0001121301
I
Brh_R007305
Buceros rhinoceros
Brh_R007305
N
TTAC_0000729501
Hydatigera taeniaeformis
TTAC_0000729501
N