ENSGMOG00000016490 (Gadus morhua)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSGMOG00000016490 T303460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.467 1.000
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.467 1.000
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.467 1.000
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.467 1.000
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.467 1.000
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.467 1.000
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.467 1.000
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.467 1.000
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.467 1.000
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.467 1.000
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.467 1.000
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.467 1.000
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.467 1.000
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.467 1.000
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.467 1.000
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.467 1.000
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.467 1.000
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.467 1.000
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.467 1.000
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.467 1.000
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.467 1.000
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.467 1.000
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.467 1.000
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000017693 Nuclear receptor 8 37

Links

Other Nuclear receptor family TFs
Other Gadus morhua TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O7_04026 Cladophialophora yegresii A1O7_04026 I 0.000
PV04_05279 Capronia semiimmersa PV04_05279 I 0.000
V499_02646 Pseudogymnoascus pannorum V499_02646 I 0.000
GMDG_04017 Pseudogymnoascus destructans GMDG_04017 I 0.000
Z517_11712 Fonsecaea pedrosoi Z517_11712 I 0.000
Z518_10184 Rhinocladiella mackenziei Z518_10184 I 0.000
G647_04666 Cladophialophora carrionii G647_04666 I 0.000
PV10_00514 Exophiala mesophila PV10_00514 I 0.000
A1O3_02841 Capronia epimyces A1O3_02841 I 0.000
MBM_01735 Marssonina brunnea MBM_01735 I 0.000
A1O1_00801 Capronia coronata A1O1_00801 I 0.000
MGG_01776 Magnaporthe oryzae MGG_01776 I 0.000
OIDMADRAFT_140709 Oidiodendron maius OIDMADRAFT_140709 I 0.000
PV07_00882 Cladophialophora immunda PV07_00882 N 0.000
PV08_08880 Exophiala spinifera PV08_08880 N 0.000
PV11_02484 Exophiala sideris PV11_02484 N 0.000
PV06_09822 Exophiala oligosperma PV06_09822 N 0.000
PV05_01304 Exophiala xenobiotica PV05_01304 N 0.000
PV04_08823 Capronia semiimmersa PV04_08823 N 0.000
PTT_14634 Pyrenophora teres PTT_14634 N 0.000
PTRG_11331 Pyrenophora triticirepentis PTRG_11331 N 0.000
PMAA_049200 Talaromyces marneffei PMAA_049200 N 0.000
PITC_029080 Penicillium italicum PITC_029080 N 0.000
PEX1_025390 Penicillium expansum PEX1_025390 N 0.000
PDIP_22920 Penicillium digitatum PDIP_22920 N 0.000
PDE_02184 Penicillium oxalicum PDE_02184 N 0.000
PCH_Pc20g01360 Penicillium rubens PCH_Pc20g01360 N 0.000
PABG_00768 Paracoccidioides brasiliensis PABG_00768 N 0.000
PAAG_03715 Paracoccidioides sp lutzii PAAG_03715 N 0.000
U727_00431380241 Penicillium solitum U727_00431380241 N 0.000
CIMG_08163 Coccidioides immitis CIMG_08163 N 0.000
Pc20g01360 Penicillium chrysogenum Pc20g01360 N 0.000
fgenesh1_pm.00771_#_78 Aspergillus carbonarius fgenesh1_pm.00771_#_78 N 0.000
estExt_Genewise1Plus.C_230145 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_230145 N 0.000
Z519_12024 Cladophialophora bantiana Z519_12024 N 0.000
Z519_01916 Cladophialophora bantiana Z519_01916 N 0.000
Z518_10852 Rhinocladiella mackenziei Z518_10852 N 0.000
Z517_05164 Fonsecaea pedrosoi Z517_05164 N 0.000
W97_07490 Coniosporium apollinis W97_07490 N 0.000
UREG_02425 Uncinocarpus reesii UREG_02425 N 0.000
PV09_03074 Verruconis gallopava PV09_03074 N 0.000
TSTA_039140 Talaromyces stipitatus TSTA_039140 N 0.000
TRV_02239 Trichophyton verrucosum TRV_02239 N 0.000
TESG_03991 Trichophyton tonsurans TESG_03991 N 0.000
TEQG_07260 Trichophyton equinum TEQG_07260 N 0.000
SNOG_12578 Phaeosphaeria nodorum SNOG_12578 N 0.000
SETTUDRAFT_164235 Setosphaeria turcica SETTUDRAFT_164235 N 0.000
PVAR5_4548 Byssochlamys spectabilis PVAR5_4548 N 0.000
PMAA_049200 Penicillium marneffei PMAA_049200 N 0.000
PV10_04925 Exophiala mesophila PV10_04925 N 0.000
Bcin07g06120 Botrytis cinerea Bcin07g06120 N 0.000
COCCADRAFT_88010 Bipolaris zeicola COCCADRAFT_88010 N 0.000
COCC4DRAFT_202082 Bipolaris maydis COCC4DRAFT_202082 N 0.000
NFIA_027200 Neosartorya fischeri CADNFIAG00002534 N 0.000
CADAORAG00002457 Aspergillus oryzae CADAORAG00002457 N 0.000
ANIA_06733 Aspergillus nidulans CADANIAG00007526 N 0.000
CADANGAG00005435 Aspergillus niger CADANGAG00005435 N 0.000
AFUA_7G05960 Aspergillus fumigatus CADAFUAG00009660 N 0.000
CADAFLAG00000474 Aspergillus flavus CADAFLAG00000474 N 0.000
ACLA_007650 Aspergillus clavatus CADACLAG00000450 N 0.000
BDDG_08162 Blastomyces dermatitidis BDDG_08162 N 0.000
COCMIDRAFT_98420 Bipolaris oryzae COCMIDRAFT_98420 N 0.000
AUEXF2481DRAFT_65216 Aureobasidium subglaciale AUEXF2481DRAFT_65216 N 0.000
ARB_01120 Arthroderma benhamiae ARB_01120 N 0.000
AOL_s00215g416 Arthrobotrys oligospora AOL_s00215g416 N 0.000
A1O7_08287 Cladophialophora yegresii A1O7_08287 N 0.000
A1O5_03005 Cladophialophora psammophila A1O5_03005 N 0.000
A1O5_01498 Cladophialophora psammophila A1O5_01498 N 0.000
A1O3_00914 Capronia epimyces A1O3_00914 N 0.000
A1O1_02509 Capronia coronata A1O1_02509 N 0.000
SNOG_12578 Stagonospora nodorum SNOG_12578 N 0.000
MCYG_02260 Microsporum canis MCYG_02260 N 0.000
H102_03320 Trichophyton rubrum H102_03320 N 0.000
MGYG_07575 Microsporum gypseum MGYG_07575 N 0.000
MCYG_02260 Arthroderma otae MCYG_02260 N 0.000
M438DRAFT_383887 Aureobasidium pullulans M438DRAFT_383887 N 0.000
LEMA_P059350.1 Leptosphaeria maculans LEMA_P059350.1 N 0.000
HMPREF1541_09227 Cyphellophora europaea HMPREF1541_09227 N 0.000
HMPREF1541_03654 Cyphellophora europaea HMPREF1541_03654 N 0.000
HMPREF1120_06404 Exophiala dermatitidis HMPREF1120_06404 N 0.000
HMPREF1120_02238 Exophiala dermatitidis HMPREF1120_02238 N 0.000
HCBG_04319 Histoplasma capsulatum HCBG_04319 N 0.000
H105_03339 Trichophyton soudanense H105_03339 N 0.000
MPH_07157 Macrophomina phaseolina MPH_07157 N 0.000
H101_04104 Trichophyton interdigitale H101_04104 N 0.000
H072_9547 Dactylellina haptotyla H072_9547 N 0.000
GSTUM_00002483001 Tuber melanosporum GSTUM_00002483001 N 0.000
G647_07244 Cladophialophora carrionii G647_07244 N 0.000
EURHEDRAFT_512897 Aspergillus ruber EURHEDRAFT_512897 N 0.000
DOTSEDRAFT_75761 Dothistroma septosporum DOTSEDRAFT_75761 N 0.000
CPC735_021860 Coccidioides posadasii CPC735_021860 N 0.000
COCVIDRAFT_111354 Bipolaris victoriae COCVIDRAFT_111354 N 0.000
COCSADRAFT_314350 Bipolaris sorokiniana COCSADRAFT_314350 N 0.000