ENSPFOG00000018110 (Poecilia formosa)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSPFOG00000018110 T304474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN

NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.991 0.971
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN

NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.991 0.971
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.991 0.971
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN

NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.991 0.971
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN

NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.991 0.971
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG

CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.991 0.971
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.991 0.971
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY

RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.991 0.971
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.991 0.971
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY

RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.991 0.971
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN

NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.991 0.971
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA

TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.991 0.971
NR2F1
M11172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.991 0.971
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.991 0.971
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH

DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.991 0.971
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.991 0.971
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.991 0.971
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN

NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.990 0.957
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN

NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.990 0.957
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA

TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.990 0.957
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB

VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.990 0.957
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN

NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.990 0.957
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD

HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.990 0.957
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA

TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.990 0.957
NR2F2
M11181_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.990 0.957
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA

TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.989 0.914
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR

YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.988 0.814
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA

TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.988 0.814
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.988 0.814
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA

TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.988 0.814
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.988 0.814
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY

RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.988 0.814
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN

NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.988 0.814
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY

RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.988 0.814
NR2F6
M11153_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.988 0.814
NR2F6
M11154_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.988 0.814
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.988 0.814
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.988 0.814
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN

NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.988 0.814
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN

NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.988 0.814
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN

NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.983 0.871
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.982 0.800
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA

TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.982 0.800
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.982 0.800
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.977 0.600
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.977 0.600
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN

NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.977 0.600
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.977 0.600
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.977 0.600
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.977 0.600
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.977 0.600
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.977 0.600
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA

TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.969 0.657
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.969 0.657
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA

TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.969 0.657
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV

BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.969 0.657
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY

RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.969 0.657
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR

YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.969 0.657
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY

RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.969 0.657
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA

TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.969 0.657
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR

YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.969 0.657
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA

TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.969 0.657
NR2C2
M11173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.969 0.657
NR2C2
M11174_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.969 0.657
NR2C2
M11175_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.969 0.657
NR2C2
M11176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.969 0.657
NR2C2
M11177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.969 0.657
NR2C2
M11178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.969 0.657
NR2C2
M11179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.969 0.657
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.969 0.657
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA

TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.969 0.643
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN

NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.965 0.614
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.962 0.614
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR

YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.960 0.629
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.960 0.629
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA

TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.960 0.629
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW

WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.960 0.629
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA

TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.960 0.629
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM

KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.952 0.614
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN

NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.952 0.614
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA

TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.952 0.614
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.952 0.614
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA

TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.952 0.614
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN

NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.952 0.614
Rora
M00819_2.00
Mus musculus
NNRGGTCA

TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.950 0.614
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA

TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.950 0.614
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA

TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.950 0.614
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA

TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.950 0.614
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN

NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.950 0.614
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.950 0.614
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.950 0.614
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH

DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.950 0.614
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN

NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.950 0.614
RORA
M11092_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.950 0.614
RORA
M11093_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.950 0.614
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.949 0.600
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA

TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.949 0.600
Rorb
M00820_2.00
Mus musculus
NRGGTCANN

NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.949 0.600
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.949 0.600
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN

NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.949 0.600
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.949 0.600
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN

NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.949 0.600
RORB
M11187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.949 0.600
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN

NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.949 0.600
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.949 0.600
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN

NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.947 0.557
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA

TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.947 0.557
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA

TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.947 0.557
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA

TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.946 0.614
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.946 0.529
RARG
M02397_2.00
Homo sapiens
VGGTCANN

NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.945 0.557
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN

NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.945 0.557
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD

HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.945 0.557
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA

TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.945 0.557
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA

TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.945 0.557
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY

RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.945 0.557
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA

TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.945 0.557
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA

TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.945 0.557
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH

DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.945 0.557
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA

TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.945 0.557
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA

TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.945 0.557
RARG
M05653_2.00
Homo sapiens
NRGGTCANV

BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.945 0.557
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN

NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.945 0.557
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH

DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.945 0.557
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA

TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.945 0.557
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.945 0.557
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.945 0.557
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA

TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.945 0.557
RARG
M11167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.945 0.557
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV

BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.945 0.557
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN

NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.945 0.557
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY

RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.945 0.557
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.943 0.514
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.943 0.571
Rara
M00185_2.00
Mus musculus
NRGGTCAN

NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.941 0.557
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA

TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.941 0.557
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB

VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.941 0.557
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA

TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.941 0.557
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA

TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.941 0.557
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA

TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.941 0.557
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA

TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.941 0.557
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA

TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.941 0.557
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA

TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.941 0.557
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA

TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.941 0.557
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN

NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.941 0.557
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN

NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.941 0.557
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV

BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.941 0.557
RARA
M05878_2.00
Homo sapiens
RAGGTCA

TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.941 0.557
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG

CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.941 0.557
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA

TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.941 0.557
RARA
M11137_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.941 0.557
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN

NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.941 0.557
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN

NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.941 0.557
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN

NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.941 0.557
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA

TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.941 0.543
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN

NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.940 0.557
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA

TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.940 0.557
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA

TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.940 0.557
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA

TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.940 0.557
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA

TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.940 0.557
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN

NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.940 0.557
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN

NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.940 0.557
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY

RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.940 0.557
RARB
M11094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.940 0.557
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH

DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.940 0.557
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN

NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.940 0.557
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.940 0.557
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA

TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.939 0.629
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH

DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.939 0.629
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN

NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.939 0.629
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG

CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.939 0.629
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS

SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.939 0.629
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS

SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.939 0.629
Rxrb
M02402_2.00
Mus musculus
VRGGTCAH

DTGACCYB
PBM
Weirauch et al.(2014)
pTH2861
0.933 0.614
RXRB
M03415_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRB_1
0.933 0.614
Rxrb
M03435_2.00
Mus musculus
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
Rxrb_1
0.933 0.614
RXRB
M05681_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
0.933 0.614
RXRB
M05682_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
0.933 0.614
RXRB
M09297_2.00
Homo sapiens
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
0.933 0.614
Rxrb
M09330_2.00
Mus musculus
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
0.933 0.614
RXRB
M05683_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
0.933 0.614
RXRB
M05684_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
0.933 0.614
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.931 0.629
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.931 0.629
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.931 0.629
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.931 0.629
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.931 0.629
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.931 0.629
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY

RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.931 0.629
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.931 0.629
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH

DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.931 0.629
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA

TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.931 0.629
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN

NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.931 0.629
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV

BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.931 0.629
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA

TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.931 0.629
RXRA
M11182_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.931 0.629
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH

DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.931 0.629
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN

NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.924 0.600
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.924 0.600
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.924 0.600
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.924 0.600
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC

GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.924 0.600
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA

TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.924 0.600
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.924 0.600
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.924 0.600
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND

HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.924 0.600
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH

DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.924 0.600
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA

TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.924 0.600
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN

NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.924 0.600
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB

VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.924 0.600
Q95WG3_ACRMI
M02424_2.00
Acropora millepora
NRAGGTCAN

NTGACCTYN
PBM
Weirauch et al.(2014)
pTH6144
0.893 0.600
Hr4
M06435_2.00
Drosophila melanogaster
AAGGTCA

TGACCTT
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
0.892 0.514
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN

NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.890 0.514
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD

HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.890 0.514
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN

NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.890 0.514
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN

NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.890 0.514
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.885 0.500
Pparg
M05884_2.00
Mus musculus
HWNTRGGKYANB

VNTRMCCYANWD
SMiLE-seq
Isakova et al.(2017)
PPARg
0.884 0.557
PPARG
M02707_2.00
Homo sapiens
STRGGTCANNDTGACCYANW

WNTRGGTCAHNNTGACCYAS
SELEX
Mathelier et al.(2014)
MA0066.1
0.884 0.557
PPARG
M09278_2.00
Homo sapiens
VWSKRGGKSARAGGKSA

TSMCCTYTSMCCYMSWB
Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A
0.884 0.557
Pparg
M09299_2.00
Mus musculus
HWBTRGGBSARAGGKNA

TNMCCTYTSVCCYAVWD
Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A
0.884 0.557
Pparg
M09612_2.00
Mus musculus
TRGGNCARAGGKCA

TGMCCTYTGNCCYA
Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511
0.884 0.557
PPARG
M11138_2.00
Homo sapiens
NNDRRGGTCAAAGGTCAHVND

HNBDTGACCTTTGACCYYHNN
Transfac
Matys et al.(2006)
V$PPARG_01
0.884 0.557
PPARG
M11139_2.00
Homo sapiens
AWBTRGGTCACNDTGACCTASTT

AASTAGGTCAHNGTGACCYAVWT
Transfac
Matys et al.(2006)
V$PPARG_02
0.884 0.557
PPARG
M11140_2.00
Homo sapiens
WWBHRGGNYAAAGKTCA

TGAMCTTTRNCCYDVWW
Transfac
Matys et al.(2006)
V$PPARG_03
0.884 0.557
PPARG
M11141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARG_Q6
0.884 0.557
PPARA
M09295_2.00
Homo sapiens
NWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWN
Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B
0.881 0.529
Ppara
M09314_2.00
Mus musculus
HWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWD
Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A
0.881 0.529
PPARA
M11183_2.00
Homo sapiens
CWRAWCYAGGNCAWAGKTCA

TGAMCTWTGNCCTRGWTYWG
Transfac
Matys et al.(2006)
V$PPARA_01
0.881 0.529
PPARA
M11184_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARA_Q6
0.881 0.529
nr1h5.S
M11194_2.00
Xenopus laevis Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRIR1_Q6
0.872 0.529
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW

WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.871 0.557
Nr1h3
M09301_2.00
Mus musculus
VDGDNCARAGKBCAN

NTGVMCTYTGNHCHB
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
0.867 0.514
NR1H3
M09264_2.00
Homo sapiens
NHRRGGBHABHNNRGGNCA

TGNCCYNNDVTDVCCYYDN
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
0.864 0.514
Nr1h2
M09620_2.00
Mus musculus
RGGTYACTNNAGGTCA

TGACCTNNAGTRACCY
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
0.847 0.514
NR6A1
M05627_2.00
Homo sapiens
NNSAAGKTCAAGKKYRN

NYRMMCTTGAMCTTSNN
SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX
0.841 0.514
NR6A1
M09284_2.00
Homo sapiens
AAGKTCAAGKTCA

TGAMCTTGAMCTT
Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B
0.841 0.514
NR6A1
M11148_2.00
Homo sapiens
NKCAAGKTCAAGKTCANN

NNTGAMCTTGAMCTTGMN
Transfac
Matys et al.(2006)
V$GCNF_01
0.841 0.514
NR6A1
M11149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCNF_Q3
0.841 0.514
NR6A1
M05628_2.00
Homo sapiens
NYSAAGKTCAAGKKCRN

NYGMMCTTGAMCTTSRN
SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX
0.841 0.514
NR4A1
M05601_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
0.828 0.586
NR4A1
M05602_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
0.828 0.586
NR4A1
M08153_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
ChIP-seq
Mathelier et al.(2014)
MA1112.1
0.828 0.586
NR4A1
M09274_2.00
Homo sapiens
AAAKGBCAN

NTGVCMTTT
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
0.828 0.586
NR4A1
M09608_2.00
Homo sapiens
NNDNAAAGGTCA

TGACCTTTNHNN
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
0.828 0.586
NR4A1
M11132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
0.828 0.586
NR4A1
M11133_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
0.828 0.586
NR4A1
M11134_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5
0.828 0.586
NR4A1
M05603_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
0.828 0.586
NR4A1
M05604_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
0.828 0.586
Nr4a1
M09317_2.00
Mus musculus
NRAADGKCA

TGMCHTTYN
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
0.828 0.571
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN

NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.820 0.500
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD

HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.820 0.500
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN

NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.820 0.500
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.820 0.500
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.820 0.500
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY

RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.820 0.500
NR1H4
M11086_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.820 0.500
NR1H4
M11087_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.820 0.500
NR1H4
M11088_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.820 0.500
NR1H4
M11089_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.820 0.500
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN

NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.820 0.486
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.820 0.557
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM

KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.820 0.557
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA

TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.820 0.557
Esr1
M00813_2.00
Mus musculus
NRKGTCANNN

NNNTGACMYN
PBM
Weirauch et al.(2013)
pTH3510
0.814 0.500
ESR1
M03356_2.00
Homo sapiens
NRGGTCAMVRTGACCTK

MAGGTCAYBKTGACCYN
SELEX
Jolma et al.(2013)
ESR1_1
0.814 0.500
ESR1
M05569_2.00
Homo sapiens
NAGGTCAYSRTGACCTN

NAGGTCAYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX
0.814 0.500
ESR1
M05571_2.00
Homo sapiens
NRGGTCANSNTGACCYN

NRGGTCANSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX
0.814 0.500
ESR1
M07985_2.00
Homo sapiens
DNBYMAAGGTCANN

NNTGACCTTKRVNH
ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford
0.814 0.500
ESR1
M08217_2.00
Homo sapiens
NHNRGGTCANNNTGNCCY

RGGNCANNNTGACCYNDN
ChIP-seq
Contrino et al.(2012)
Mv66
0.814 0.500
ESR1
M08218_2.00
Homo sapiens
CCAAGGTCAS

STGACCTTGG
ChIP-seq
Contrino et al.(2012)
Mv67
0.814 0.500
ESR1
M09267_2.00
Homo sapiens
RGGKCABMNTGMCCY

RGGKCANKVTGMCCY
Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A
0.814 0.500
Esr1
M09309_2.00
Mus musculus
RGGDCABKSTGWCCY

RGGWCASMVTGHCCY
Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A
0.814 0.500
ESR1
M09604_2.00
Homo sapiens
NRGGTCANNNTGACC

GGTCANNNTGACCYN
Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished
0.814 0.500
ESR1
M11098_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_01
0.814 0.500
ESR1
M11099_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q4
0.814 0.500
ESR1
M11100_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01
0.814 0.500
ESR1
M11101_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02
0.814 0.500
ESR1
M11102_2.00
Homo sapiens
NHRGGTCAVNNHNNHYBNN

NNVRDNNDNNBTGACCYDN
Transfac
Matys et al.(2006)
V$ER_Q6
0.814 0.500
ESR1
M11103_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_04
0.814 0.500
ESR1
M11104_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_05
0.814 0.500
ESR1
M05570_2.00
Homo sapiens
NAGGTCAYSRYGACCTH

DAGGTCRYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX
0.814 0.500
ESR1
M05572_2.00
Homo sapiens
NRGGTCANSBYGACCYN

NRGGTCRVSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX
0.814 0.500
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH

DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.814 0.529
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN

NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.814 0.529
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA

TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.814 0.529
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA

TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.814 0.529
THRA
M11135_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.814 0.529
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN

NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.812 0.543
Hnf4a
M00182_2.00
Mus musculus
NNRGKYMRNN

NNYKRMCYNN
PBM
Badis et al.(2009)
Hnf4a_2640
0.805 0.571
HNF4A
M03357_2.00
Homo sapiens
RWTGRACTTTGSACYB

VRGTSCAAAGTYCAWY
SELEX
Jolma et al.(2013)
HNF4A_1
0.805 0.571
HNF4A
M03358_2.00
Homo sapiens
RRGGKCAAAGTCCRBN

NVYGGACTTTGMCCYY
SELEX
Jolma et al.(2013)
HNF4A_2
0.805 0.571
HNF4A
M03359_2.00
Homo sapiens
NDTGGACTTTGDACYB

VRGTHCAAAGTCCAHN
SELEX
Jolma et al.(2013)
HNF4A_3
0.805 0.571
HNF4A
M03360_2.00
Homo sapiens
RRGGTCAAAGKTCA

TGAMCTTTGACCYY
SELEX
Jolma et al.(2013)
HNF4A_4
0.805 0.571
HNF4A
M03361_2.00
Homo sapiens
VRGGTCAAAGTCCANN

NNTGGACTTTGACCYB
SELEX
Jolma et al.(2013)
HNF4A_5
0.805 0.571
HNF4A
M03362_2.00
Homo sapiens
RRGTYCAAAGKTCAH

DTGAMCTTTGRACYY
SELEX
Jolma et al.(2013)
HNF4A_6
0.805 0.571
Hnf4a
M03426_2.00
Mus musculus
RRGGTCAAAGTCCANN

NNTGGACTTTGACCYY
SELEX
Jolma et al.(2013)
Hnf4a_1
0.805 0.571
HNF4A
M05573_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_1
0.805 0.571
HNF4A
M05574_2.00
Homo sapiens
RRGGTCAAAGTCCAH

DTGGACTTTGACCYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_2
0.805 0.571
HNF4A
M05575_2.00
Homo sapiens
RRGTCCAAAGGTCRN

NYGACCTTTGGACYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_3
0.805 0.571
HNF4A
M05576_2.00
Homo sapiens
DTGGACTTTGGACYY

RRGTCCAAAGTCCAH
SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_4
0.805 0.571
HNF4A
M08219_2.00
Homo sapiens
VRGDBCAAAGKYCAN

NTGRMCTTTGVHCYB
ChIP-seq
Contrino et al.(2012)
Mv81
0.805 0.571
HNF4A
M08220_2.00
Homo sapiens
AGTCCA

TGGACT
ChIP-seq
Contrino et al.(2012)
Mv82
0.805 0.571
HNF4A
M09268_2.00
Homo sapiens
VRGKNCAAAGTYCA

TGRACTTTGNMCYB
Misc
Kulakovskiy et al.(2013)
HNF4A_HUMAN.H11MO.0.A
0.805 0.571
Hnf4a
M09308_2.00
Mus musculus
NRGKBCAAAGTYCA

TGRACTTTGVMCYN
Misc
Kulakovskiy et al.(2013)
HNF4A_MOUSE.H11MO.0.A
0.805 0.571
HNF4A
M09605_2.00
Homo sapiens
NNVRGDNCAAAGKYCA

TGRMCTTTGNHCYBNN
Misc
Heinz et al.(2010)
HepG2-HNF4a_GSE25021
0.805 0.571
HNF4A
M11105_2.00
Homo sapiens
VRGGNCAAAGKYCRB

VYGRMCTTTGNCCYB
Transfac
Matys et al.(2006)
V$HNF4_01_B
0.805 0.571
HNF4A
M11106_2.00
Homo sapiens
NNNRGDBYAAAGKBCANND

HNNTGVMCTTTRVHCYNNN
Transfac
Matys et al.(2006)
V$HNF4_01
0.805 0.571
HNF4A
M11107_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4A_09
0.805 0.571
HNF4A
M11108_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4A_10
0.805 0.571
HNF4A
M11109_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4ALPHA_Q6
0.805 0.571
HNF4A
M11110_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4A_Q3
0.805 0.571
HNF4A
M11111_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4A_Q6_01
0.805 0.571
HNF4A
M11112_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4_Q6_01
0.805 0.571
HNF4A
M11113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4_Q6_02
0.805 0.571
HNF4A
M11114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4_Q6_03
0.805 0.571
HNF4A
M11115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4_Q6_04
0.805 0.571
HNF4A
M05577_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_1
0.805 0.571
HNF4A
M05578_2.00
Homo sapiens
RRGGTCAAAGTCCRN

NYGGACTTTGACCYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_2
0.805 0.571
HNF4A
M05579_2.00
Homo sapiens
RRGTCCAAAGGTCRN

NYGACCTTTGGACYY
SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_3
0.805 0.571
HNF4A
M05580_2.00
Homo sapiens
DTGGACTTTGGACYY

RRGTCCAAAGTCCAH
SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_4
0.805 0.571
Esr2
M01297_2.00
Mus musculus
NNRGGTCAH

DTGACCYNN
PBM
Lambert et al.(2019)
pTH3511
0.804 0.500
ESR2
M08154_2.00
Homo sapiens
RGGTCASNNWGNCCY

RGGNCWNNSTGACCY
ChIP-seq
Mathelier et al.(2014)
MA0258.2
0.804 0.500
ESR2
M09279_2.00
Homo sapiens
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
0.804 0.500
Esr2
M09311_2.00
Mus musculus
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
0.804 0.500
ESR2
M11146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
0.804 0.500
ESR2
M11147_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5
0.804 0.500
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN

NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.803 0.529
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH

DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.803 0.529
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH

DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.803 0.529
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.803 0.529
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN

NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.803 0.529
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.803 0.529
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH

DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.803 0.529
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA

TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.803 0.529
THRB
M11150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.803 0.529
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN

NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.803 0.529
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN

NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.803 0.529
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.803 0.529
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH

DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.803 0.529
Nr4a2
M00818_2.00
Mus musculus
AAAGGTCA

TGACCTTT
PBM
Weirauch et al.(2013)
pTH3467
0.794 0.600
NR4A2
M03383_2.00
Homo sapiens
AGGTCAHNNNDTGACCT

AGGTCAHNNNDTGACCT
SELEX
Jolma et al.(2013)
NR4A2_1
0.794 0.600
NR4A2
M03384_2.00
Homo sapiens
TGACCTTTAAAGGTCA

TGACCTTTAAAGGTCA
SELEX
Jolma et al.(2013)
NR4A2_2
0.794 0.600
NR4A2
M03385_2.00
Homo sapiens
NBTAAAGGTCA

TGACCTTTAVN
SELEX
Jolma et al.(2013)
NR4A2_3
0.794 0.600
NR4A2
M05639_2.00
Homo sapiens
NWAAKGTCAN

NTGACMTTWN
SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX
0.794 0.600
NR4A2
M05881_2.00
Homo sapiens
NAAAKGTYA

TRACMTTTN
SMiLE-seq
Isakova et al.(2017)
NR4A2
0.794 0.600
NR4A2
M09286_2.00
Homo sapiens
RAAGGTCAV

BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C
0.794 0.600
Nr4a2
M09323_2.00
Mus musculus
RAAGGTCAV

BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C
0.794 0.600
NR4A2
M11151_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3_01
0.794 0.600
NR4A2
M11152_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3
0.794 0.600
NR4A2
M08461_2.00
Homo sapiens
RAGGTCAM

KTGACCTY
COMPILED
Mathelier et al.(2014)
MA0160.1
0.794 0.600
NR4A2
M05640_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX
0.794 0.600
Hnf4
M03935_2.00
Drosophila melanogaster
RGGKCAAAGGTCA

TGACCTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_1
0.792 0.600
Hnf4
M03936_2.00
Drosophila melanogaster
RGGKCAAAGTYCA

TGRACTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_2
0.792 0.600
Hnf4
M03937_2.00
Drosophila melanogaster
RGTVCAAAGKTCR

YGAMCTTTGBACY
SELEX
Nitta et al.(2015)
Hnf4_3
0.792 0.600
Hnf4
M03938_2.00
Drosophila melanogaster
RTGRACTTTGGACY

RGTCCAAAGTYCAY
SELEX
Nitta et al.(2015)
Hnf4_4
0.792 0.600
Hnf4
M06428_2.00
Drosophila melanogaster
DKNKWSSNGGGGTCA

TGACCCCNSSWMNMH
B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914
0.792 0.600
Hnf4
M06429_2.00
Drosophila melanogaster
GGGGTCAH

DTGACCCC
B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914
0.792 0.600
HNF4G
M08155_2.00
Homo sapiens
NVRGDNCAAAGKYCA

TGRMCTTTGNHCYBN
ChIP-seq
Mathelier et al.(2014)
MA0484.1
0.791 0.529
HNF4G
M09287_2.00
Homo sapiens
VRGDNCAAAGKYCA

TGRMCTTTGNHCYB
Misc
Kulakovskiy et al.(2013)
HNF4G_HUMAN.H11MO.0.B
0.791 0.529
Hnf4g
M09307_2.00
Mus musculus
VRGDNCAAAGKYCA

TGRMCTTTGNHCYB
Misc
Kulakovskiy et al.(2013)
HNF4G_MOUSE.H11MO.0.C
0.791 0.529
HNF4G
M11155_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4G_01
0.791 0.529
HNF4G
M11156_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF4G_02
0.791 0.529
Nr5a2
M00816_2.00
Mus musculus
VAAGGTCR

YGACCTTB
PBM
Weirauch et al.(2013)
pTH3468
0.790 0.557
Nr5a2
M08158_2.00
Mus musculus
VRDBTCAAGGYCANN

NNTGRCCTTGAVHYB
ChIP-seq
Mathelier et al.(2014)
MA0505.1
0.790 0.557
Nr5a2
M09320_2.00
Mus musculus
NBYCAAGGYCA

TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
0.790 0.557
Nr5a2
M09616_2.00
Mus musculus
BYCAAGGYCA

TGRCCTTGRV
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
0.790 0.557
Nr5a2
M09615_2.00
Mus musculus
BYCAAGGYCA

TGRCCTTGRV
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
0.790 0.557
NR5A2
M05589_2.00
Homo sapiens
YCAAGGYCRYGRCCTTSR

YSAAGGYCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
0.766 0.571
NR5A2
M05590_2.00
Homo sapiens
NYCAAGGTCAH

DTGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
0.766 0.571
NR5A2
M05591_2.00
Homo sapiens
YGRCCTTSVNYSAAGGYCR

YGRCCTTSRNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
0.766 0.571
NR5A2
M09271_2.00
Homo sapiens
NBYCAAGGYCA

TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
0.766 0.571
NR5A2
M11126_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
0.766 0.571
NR5A2
M11127_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5
0.766 0.571
NR5A2
M11128_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q6
0.766 0.571
NR5A2
M05592_2.00
Homo sapiens
YCAAGGYCRYGACCTTSR

YSAAGGTCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
0.766 0.571
NR5A2
M05593_2.00
Homo sapiens
NYCAAGGTCRH

DYGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
0.766 0.571
NR5A2
M05594_2.00
Homo sapiens
YGRCCTTSVNBSAAGGYCR

YGRCCTTSVNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
0.766 0.571
NR1D2
M05659_2.00
Homo sapiens
DWWNKRKGTYANTRKGTYRN

NYRACMYANTRACMYMNWWH
SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX
0.752 0.543
Nr1d2
M09313_2.00
Mus musculus
NVRDVWVTRRGTCANDVDN

NHBHNTGACYYABWBHYBN
Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A
0.752 0.543
NR1D2
M05660_2.00
Homo sapiens
NWWNBRGGKYAVTRGGKCRN

NYGMCCYABTRMCCYVNWWN
SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX
0.752 0.543
NR1D1
M05605_2.00
Homo sapiens
NWWNTRGGTYASTRGGTCAN

NTGACCYASTRACCYANWWN
SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX
0.748 0.543
NR1D1
M09276_2.00
Homo sapiens
DRVNMASTGGGNCANDNDN

NHNHNTGNCCCASTKNBYH
Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B
0.748 0.543
Nr1d1
M09310_2.00
Mus musculus
DRVNMASTGGGNCANDNDN

NHNHNTGNCCCASTKNBYH
Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A
0.748 0.543
NR1D1
M11136_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6
0.748 0.543
NR1D1
M05606_2.00
Homo sapiens
NAWNKRGGTYAGTRGGTCRN

NYGACCYACTRACCYMNWTN
SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX
0.748 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000018200 Nuclear receptor 1 70

Links

Other Nuclear receptor family TFs
Other Poecilia formosa TFs

3402 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PLT1 Arabidopsis thaliana AT3G20840 D
ANT Arabidopsis thaliana AT4G37750 D
AIL6 Arabidopsis thaliana AT5G10510 D
AIL7 Arabidopsis thaliana AT5G65510 D
Q6SA75_TOBAC Nicotiana tabacum Q6SA75_TOBAC D
BBM Arabidopsis lyrata Al_scaffold_0006_1650 I
AIL7 Arabidopsis lyrata Al_scaffold_0008_3101 I
AMTR_s00019p00225230 Amborella trichopoda AMTR_s00019p00225230 I
AMTR_s00024p00227390 Amborella trichopoda AMTR_s00024p00227390 I
AMTR_s00065p00077750 Amborella trichopoda AMTR_s00065p00077750 I
AMTR_s00066p00028460 Amborella trichopoda AMTR_s00066p00028460 I
PLT2 Arabidopsis thaliana AT1G51190 I
AIL1 Arabidopsis thaliana AT1G72570 I
AT1G79700 Arabidopsis thaliana AT1G79700 I
BBM Arabidopsis thaliana AT5G17430 I
AIL5 Arabidopsis thaliana AT5G57390 I
BGIOSGA000316 Oryza indica BGIOSGA000316 I
BGIOSGA008619 Oryza indica BGIOSGA008619 I
BGIOSGA010867 Oryza indica BGIOSGA010867 I
BGIOSGA011170 Oryza indica BGIOSGA011170 I
BGIOSGA011350 Oryza indica BGIOSGA011350 I
BGIOSGA013636 Oryza indica BGIOSGA013636 I
BGIOSGA016726 Oryza indica BGIOSGA016726 I
BGIOSGA017263 Oryza indica BGIOSGA017263 I
BGIOSGA020753 Oryza indica BGIOSGA020753 I
BGIOSGA025077 Oryza indica BGIOSGA025077 I
BGIOSGA035153 Oryza indica BGIOSGA035153 I
Bo1g003450 Brassica oleracea Bo1g003450 I
Bo1g108580 Brassica oleracea Bo1g108580 I
Bo2g009900 Brassica oleracea Bo2g009900 I
Bo2g013700 Brassica oleracea Bo2g013700 I
Bo2g032400 Brassica oleracea Bo2g032400 I
Bo2g076920 Brassica oleracea Bo2g076920 I
Bo3g006680 Brassica oleracea Bo3g006680 I
Bo3g099090 Brassica oleracea Bo3g099090 I
Bo3g153310 Brassica oleracea Bo3g153310 I
Bo5g081310 Brassica oleracea Bo5g081310 I
Bo5g105180 Brassica oleracea Bo5g105180 I
Bo6g024850 Brassica oleracea Bo6g024850 I
Bo7g118740 Brassica oleracea Bo7g118740 I
Bo9g160240 Brassica oleracea Bo9g160240 I
Bo9g171990 Brassica oleracea Bo9g171990 I
Bra006065 Brassica rapa Bra006065 I
Bra008040 Brassica rapa Bra008040 I
Bra009026 Brassica rapa Bra009026 I
Bra011782 Brassica rapa Bra011782 I
Bra013978 Brassica rapa Bra013978 I
Bra017852 Brassica rapa Bra017852 I
Bra018899 Brassica rapa Bra018899 I
Bra020444 Brassica rapa Bra020444 I
Bra024394 Brassica rapa Bra024394 I
Bra028584 Brassica rapa Bra028584 I
Bra030451 Brassica rapa Bra030451 I
Bra031234 Brassica rapa Bra031234 I
BRADI1G07290 Brachypodium distachyon BRADI1G07290 I
BRADI1G31337 Brachypodium distachyon BRADI1G31337 I
BRADI1G57560 Brachypodium distachyon BRADI1G57560 I
BRADI1G64240 Brachypodium distachyon BRADI1G64240 I
BRADI1G69207 Brachypodium distachyon BRADI1G69207 I
BRADI1G72890 Brachypodium distachyon BRADI1G72890 I
BRADI2G57747 Brachypodium distachyon BRADI2G57747 I
BRADI3G48697 Brachypodium distachyon BRADI3G48697 I
BRADI5G14960 Brachypodium distachyon BRADI5G14960 I
F775_01822 Aegilops tauschii F775_01822 I
F775_02289 Aegilops tauschii F775_02289 I
F775_18791 Aegilops tauschii F775_18791 I
F775_21796 Aegilops tauschii F775_21796 I
F775_23155 Aegilops tauschii F775_23155 I
F775_52688 Aegilops tauschii F775_52688 I
fgenesh1_pm.C_scaffold_2001254 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001254 I
AIL5 Arabidopsis lyrata fgenesh2_kg.8__1655__AT5G57390.1 I
GLYMA0041S50 Glycine max GLYMA0041S50 I
GLYMA01G02760 Glycine max GLYMA01G02760 I
GLYMA01G40380 Glycine max GLYMA01G40380 I
GLYMA04G05080 Glycine max GLYMA04G05080 I
GLYMA05G22970 Glycine max GLYMA05G22970 I
GLYMA06G05170 Glycine max GLYMA06G05170 I
GLYMA07G04265 Glycine max GLYMA07G04265 I
GLYMA08G38190 Glycine max GLYMA08G38190 I
GLYMA09G38370 Glycine max GLYMA09G38370 I
GLYMA10G31440 Glycine max GLYMA10G31440 I
GLYMA11G04910 Glycine max GLYMA11G04910 I
GLYMA11G14040 Glycine max GLYMA11G14040 I
GLYMA12G06010 Glycine max GLYMA12G06010 I
GLYMA13G00950 Glycine max GLYMA13G00950 I
GLYMA14G10130 Glycine max GLYMA14G10130 I
GLYMA16G00950 Glycine max GLYMA16G00950 I
GLYMA17G07010 Glycine max GLYMA17G07010 I
GLYMA17G17010 Glycine max GLYMA17G17010 I
GLYMA18G29400 Glycine max GLYMA18G29400 I
GLYMA18G47980 Glycine max GLYMA18G47980 I
GRMZM2G021573 Zea mays GRMZM2G021573 I
GRMZM2G028151 Zea mays GRMZM2G028151 I
GRMZM2G086573 Zea mays GRMZM2G086573 I
GRMZM2G139082 Zea mays GRMZM2G139082 I
GRMZM2G141638 Zea mays GRMZM2G141638 I
GRMZM2G317160 Zea mays GRMZM2G317160 I
GRMZM2G366434 Zea mays GRMZM2G366434 I
GSMUA_Achr11G11660_001 Musa acuminata GSMUA_Achr11G11660_001 I
GSMUA_Achr1G12410_001 Musa acuminata GSMUA_Achr1G12410_001 I
GSMUA_Achr1G21950_001 Musa acuminata GSMUA_Achr1G21950_001 I
GSMUA_Achr1G24940_001 Musa acuminata GSMUA_Achr1G24940_001 I
GSMUA_Achr2G05880_001 Musa acuminata GSMUA_Achr2G05880_001 I
GSMUA_Achr3G05070_001 Musa acuminata GSMUA_Achr3G05070_001 I
GSMUA_Achr3G15150_001 Musa acuminata GSMUA_Achr3G15150_001 I
GSMUA_Achr3G21460_001 Musa acuminata GSMUA_Achr3G21460_001 I
GSMUA_Achr3G30690_001 Musa acuminata GSMUA_Achr3G30690_001 I
GSMUA_Achr4G32280_001 Musa acuminata GSMUA_Achr4G32280_001 I
GSMUA_Achr5G25620_001 Musa acuminata GSMUA_Achr5G25620_001 I
GSMUA_Achr6G28550_001 Musa acuminata GSMUA_Achr6G28550_001 I
GSMUA_Achr7G00740_001 Musa acuminata GSMUA_Achr7G00740_001 I
GSMUA_Achr7G27500_001 Musa acuminata GSMUA_Achr7G27500_001 I
GSMUA_Achr8G09110_001 Musa acuminata GSMUA_Achr8G09110_001 I
GSMUA_Achr8G26510_001 Musa acuminata GSMUA_Achr8G26510_001 I
GSMUA_Achr9G07890_001 Musa acuminata GSMUA_Achr9G07890_001 I
GSMUA_Achr9G13660_001 Musa acuminata GSMUA_Achr9G13660_001 I
GSMUA_AchrUn_randomG04590_001 Musa acuminata GSMUA_AchrUn_randomG04590_001 I
GSMUA_AchrUn_randomG23040_001 Musa acuminata GSMUA_AchrUn_randomG23040_001 I
LPERR01G35180 Leersia perrieri LPERR01G35180 I
LPERR02G19570 Leersia perrieri LPERR02G19570 I
LPERR03G04950 Leersia perrieri LPERR03G04950 I
LPERR03G08470 Leersia perrieri LPERR03G08470 I
LPERR03G13190 Leersia perrieri LPERR03G13190 I
LPERR03G29930 Leersia perrieri LPERR03G29930 I
LPERR04G14400 Leersia perrieri LPERR04G14400 I
LPERR04G23440 Leersia perrieri LPERR04G23440 I
LPERR06G19450 Leersia perrieri LPERR06G19450 I
LPERR09G07850 Leersia perrieri LPERR09G07850 I
LPERR11G09100 Leersia perrieri LPERR11G09100 I
MLOC_10221 Hordeum vulgare MLOC_10221 I
MLOC_63425 Hordeum vulgare MLOC_63425 I
MLOC_70754 Hordeum vulgare MLOC_70754 I
MTR_1g017400 Medicago truncatula MTR_1g017400 I
MTR_2g098180 Medicago truncatula MTR_2g098180 I
MTR_3g103460 Medicago truncatula MTR_3g103460 I
MTR_4g065370 Medicago truncatula MTR_4g065370 I
MTR_4g097520 Medicago truncatula MTR_4g097520 I
MTR_4g127930 Medicago truncatula MTR_4g127930 I
MTR_5g015070 Medicago truncatula MTR_5g015070 I
MTR_5g031880 Medicago truncatula MTR_5g031880 I
MTR_7g080460 Medicago truncatula MTR_7g080460 I
MTR_8g020510 Medicago truncatula MTR_8g020510 I
MTR_8g068510 Medicago truncatula MTR_8g068510 I
OB0046G10040 Oryza brachyantha OB0046G10040 I
OB02G31260 Oryza brachyantha OB02G31260 I
OB03G15730 Oryza brachyantha OB03G15730 I
OB03G19620 Oryza brachyantha OB03G19620 I
OB04G25060 Oryza brachyantha OB04G25060 I
OB04G34790 Oryza brachyantha OB04G34790 I
OB07G11390 Oryza brachyantha OB07G11390 I
OBART01G40650 Oryza barthii OBART01G40650 I
OBART02G24000 Oryza barthii OBART02G24000 I
OBART03G05640 Oryza barthii OBART03G05640 I
OBART03G09490 Oryza barthii OBART03G09490 I
OBART03G14970 Oryza barthii OBART03G14970 I
OBART03G35620 Oryza barthii OBART03G35620 I
OBART06G23420 Oryza barthii OBART06G23420 I
OBART07G01750 Oryza barthii OBART07G01750 I
OBART11G10210 Oryza barthii OBART11G10210 I
OGLUM01G44820 Oryza glumaepatula OGLUM01G44820 I
OGLUM02G24380 Oryza glumaepatula OGLUM02G24380 I
OGLUM03G05600 Oryza glumaepatula OGLUM03G05600 I
OGLUM03G09570 Oryza glumaepatula OGLUM03G09570 I
OGLUM03G15150 Oryza glumaepatula OGLUM03G15150 I
OGLUM03G35380 Oryza glumaepatula OGLUM03G35380 I
OGLUM04G17960 Oryza glumaepatula OGLUM04G17960 I
OGLUM04G27700 Oryza glumaepatula OGLUM04G27700 I
OGLUM06G24650 Oryza glumaepatula OGLUM06G24650 I
OGLUM11G09770 Oryza glumaepatula OGLUM11G09770 I
OLONG_006739 Oryza longistaminata OLONG_006739 I
OLONG_009149 Oryza longistaminata OLONG_009149 I
OLONG_023703 Oryza longistaminata OLONG_023703 I
OLONG_023707 Oryza longistaminata OLONG_023707 I
OLONG_027834 Oryza longistaminata OLONG_027834 I
OMERI01G37620 Oryza meridionalis OMERI01G37620 I
OMERI03G05340 Oryza meridionalis OMERI03G05340 I
OMERI03G08830 Oryza meridionalis OMERI03G08830 I
OMERI03G32840 Oryza meridionalis OMERI03G32840 I
OMERI04G14990 Oryza meridionalis OMERI04G14990 I
OMERI04G23230 Oryza meridionalis OMERI04G23230 I
OMERI07G00980 Oryza meridionalis OMERI07G00980 I
OMERI11G08930 Oryza meridionalis OMERI11G08930 I
ONIVA01G24520 Oryza nivara ONIVA01G24520 I
ONIVA01G24550 Oryza nivara ONIVA01G24550 I
ONIVA01G45690 Oryza nivara ONIVA01G45690 I
ONIVA02G39120 Oryza nivara ONIVA02G39120 I
ONIVA03G05480 Oryza nivara ONIVA03G05480 I
ONIVA03G37110 Oryza nivara ONIVA03G37110 I
ONIVA04G26260 Oryza nivara ONIVA04G26260 I
ONIVA06G20030 Oryza nivara ONIVA06G20030 I
ONIVA07G00600 Oryza nivara ONIVA07G00600 I
ONIVA11G10300 Oryza nivara ONIVA11G10300 I
OPUNC01G39400 Oryza punctata OPUNC01G39400 I
OPUNC02G21890 Oryza punctata OPUNC02G21890 I
OPUNC03G05370 Oryza punctata OPUNC03G05370 I
OPUNC03G09070 Oryza punctata OPUNC03G09070 I
OPUNC03G32650 Oryza punctata OPUNC03G32650 I
OPUNC04G15650 Oryza punctata OPUNC04G15650 I
OPUNC04G25250 Oryza punctata OPUNC04G25250 I
OPUNC06G21150 Oryza punctata OPUNC06G21150 I
OPUNC07G01740 Oryza punctata OPUNC07G01740 I
OPUNC11G09340 Oryza punctata OPUNC11G09340 I
ORGLA01G0345800 Oryza glaberrima ORGLA01G0345800 I
ORGLA02G0207800 Oryza glaberrima ORGLA02G0207800 I
ORGLA03G0053700 Oryza glaberrima ORGLA03G0053700 I
ORGLA03G0090300 Oryza glaberrima ORGLA03G0090300 I
ORGLA03G0326600 Oryza glaberrima ORGLA03G0326600 I
ORGLA03G0393500 Oryza glaberrima ORGLA03G0393500 I
ORGLA04G0150400 Oryza glaberrima ORGLA04G0150400 I
ORGLA04G0240800 Oryza glaberrima ORGLA04G0240800 I
ORGLA11G0090500 Oryza glaberrima ORGLA11G0090500 I
ORUFI01G43970 Oryza rufipogon ORUFI01G43970 I
ORUFI02G25430 Oryza rufipogon ORUFI02G25430 I
ORUFI03G05420 Oryza rufipogon ORUFI03G05420 I
ORUFI03G09610 Oryza rufipogon ORUFI03G09610 I
ORUFI03G15620 Oryza rufipogon ORUFI03G15620 I
ORUFI03G37050 Oryza rufipogon ORUFI03G37050 I
ORUFI04G19390 Oryza rufipogon ORUFI04G19390 I
ORUFI04G29440 Oryza rufipogon ORUFI04G29440 I
ORUFI07G01630 Oryza rufipogon ORUFI07G01630 I
ORUFI11G10800 Oryza rufipogon ORUFI11G10800 I
OS01G0899800 Oryza sativa OS01G0899800 I
OS03G0176300 Oryza sativa OS03G0176300 I
OS03G0232200 Oryza sativa OS03G0232200 I
OS03G0313100 Oryza sativa OS03G0313100 I
OS04G0504500 Oryza sativa OS04G0504500 I
OS04G0653600 Oryza sativa OS04G0653600 I
OS06G0657500 Oryza sativa OS06G0657500 I
OS11G0295900 Oryza sativa OS11G0295900 I
PGSC0003DMG400004921 Solanum tuberosum PGSC0003DMG400004921 I
PGSC0003DMG400013587 Solanum tuberosum PGSC0003DMG400013587 I
PGSC0003DMG400016252 Solanum tuberosum PGSC0003DMG400016252 I
POPTR_0001s05580 Populus trichocarpa POPTR_0001s05580 I
POPTR_0001s16960 Populus trichocarpa POPTR_0001s16960 I
POPTR_0002s11550 Populus trichocarpa POPTR_0002s11550 I
POPTR_0003s06330 Populus trichocarpa POPTR_0003s06330 I
POPTR_0003s20470 Populus trichocarpa POPTR_0003s20470 I
POPTR_0005s19220 Populus trichocarpa POPTR_0005s19220 I
POPTR_0006s18330 Populus trichocarpa POPTR_0006s18330 I
POPTR_0007s14210 Populus trichocarpa POPTR_0007s14210 I
POPTR_0007s14690 Populus trichocarpa POPTR_0007s14690 I
POPTR_0008s07610 Populus trichocarpa POPTR_0008s07610 I
POPTR_0010s18840 Populus trichocarpa POPTR_0010s18840 I
POPTR_0014s01260 Populus trichocarpa POPTR_0014s01260 I
POPTR_0018s09900 Populus trichocarpa POPTR_0018s09900 I
PRUPE_ppa002612mg Prunus persica PRUPE_ppa002612mg I
PRUPE_ppa003839mg Prunus persica PRUPE_ppa003839mg I
PRUPE_ppa015833mg Prunus persica PRUPE_ppa015833mg I
PRUPE_ppa017502mg Prunus persica PRUPE_ppa017502mg I
PRUPE_ppa019186mg Prunus persica PRUPE_ppa019186mg I
PRUPE_ppa022980mg Prunus persica PRUPE_ppa022980mg I
PRUPE_ppa023077mg Prunus persica PRUPE_ppa023077mg I
Sb01g006830 Sorghum bicolor Sb01g006830 I
Sb01g037210 Sorghum bicolor Sb01g037210 I
Sb01g042090 Sorghum bicolor Sb01g042090 I
Sb01g045420 Sorghum bicolor Sb01g045420 I
Sb02g002080 Sorghum bicolor Sb02g002080 I
Sb03g042810 Sorghum bicolor Sb03g042810 I
Sb04g025960 Sorghum bicolor Sb04g025960 I
Sb06g031120 Sorghum bicolor Sb06g031120 I
Sb10g026150 Sorghum bicolor Sb10g026150 I
PLT2 Arabidopsis lyrata scaffold_104875.1 I
PLT1 Arabidopsis lyrata scaffold_302490.1 I
AIL6 Arabidopsis lyrata scaffold_601064.1 I
ANT Arabidopsis lyrata scaffold_700297.1 I
SELMODRAFT_107288 Selaginella moellendorffii SELMODRAFT_107288 I
SELMODRAFT_1154 Selaginella moellendorffii SELMODRAFT_1154 I
SELMODRAFT_17085 Selaginella moellendorffii SELMODRAFT_17085 I
SELMODRAFT_17086 Selaginella moellendorffii SELMODRAFT_17086 I
SELMODRAFT_17087 Selaginella moellendorffii SELMODRAFT_17087 I
SELMODRAFT_17095 Selaginella moellendorffii SELMODRAFT_17095 I
Si008325m.g Setaria italica Si008325m.g I
Si016558m.g Setaria italica Si016558m.g I
Si021959m.g Setaria italica Si021959m.g I
Si028170m.g Setaria italica Si028170m.g I
Si029185m.g Setaria italica Si029185m.g I
Si034505m.g Setaria italica Si034505m.g I
Si034722m.g Setaria italica Si034722m.g I
Si035073m.g Setaria italica Si035073m.g I
Si040030m.g Setaria italica Si040030m.g I
Solyc02g092050.2 Solanum lycopersicum Solyc02g092050.2 I
Solyc03g123430.2 Solanum lycopersicum Solyc03g123430.2 I
Solyc04g077490.2 Solanum lycopersicum Solyc04g077490.2 I
Solyc05g051380.2 Solanum lycopersicum Solyc05g051380.2 I
Solyc07g018290.2 Solanum lycopersicum Solyc07g018290.2 I
Solyc11g008560.1 Solanum lycopersicum Solyc11g008560.1 I
Solyc11g010710.1 Solanum lycopersicum Solyc11g010710.1 I
Solyc11g061750.1 Solanum lycopersicum Solyc11g061750.1 I
TCM_000844 Theobroma cacao TCM_000844 I
TCM_000974 Theobroma cacao TCM_000974 I
TCM_025114 Theobroma cacao TCM_025114 I
TCM_029127 Theobroma cacao TCM_029127 I
TCM_034652 Theobroma cacao TCM_034652 I
TCM_039203 Theobroma cacao TCM_039203 I
TCM_040576 Theobroma cacao TCM_040576 I
Traes_2AL_2A39D7445 Triticum aestivum Traes_2AL_2A39D7445 I
Traes_2AL_7E3EE8C87 Triticum aestivum Traes_2AL_7E3EE8C87 I
Traes_2BL_569371098 Triticum aestivum Traes_2BL_569371098 I
Traes_2BL_8BDCCE9F8 Triticum aestivum Traes_2BL_8BDCCE9F8 I
Traes_2BL_EBA73F94F Triticum aestivum Traes_2BL_EBA73F94F I
Traes_2DL_3C1E0538E Triticum aestivum Traes_2DL_3C1E0538E I
TRAES3BF114600210CFD_g Triticum aestivum TRAES3BF114600210CFD_g I
Traes_4AS_231DDE5DB Triticum aestivum Traes_4AS_231DDE5DB I
Traes_4AS_93BB8FB3E Triticum aestivum Traes_4AS_93BB8FB3E I
Traes_4BL_D4491E3AB Triticum aestivum Traes_4BL_D4491E3AB I
Traes_4DL_63ACC4A09 Triticum aestivum Traes_4DL_63ACC4A09 I
Traes_4DL_6598DAF2E Triticum aestivum Traes_4DL_6598DAF2E I
Traes_5BL_E491AA5F3 Triticum aestivum Traes_5BL_E491AA5F3 I
TRIUR3_12123 Triticum urartu TRIUR3_12123 I
TRIUR3_13072 Triticum urartu TRIUR3_13072 I
TRIUR3_18541 Triticum urartu TRIUR3_18541 I
TRIUR3_22176 Triticum urartu TRIUR3_22176 I
TRIUR3_23944 Triticum urartu TRIUR3_23944 I
TRIUR3_26191 Triticum urartu TRIUR3_26191 I
TRIUR3_28150 Triticum urartu TRIUR3_28150 I
TRIUR3_32369 Triticum urartu TRIUR3_32369 I
TRIUR3_32420 Triticum urartu TRIUR3_32420 I
VIT_00s0772g00020 Vitis vinifera VIT_00s0772g00020 I
VIT_00s1291g00010 Vitis vinifera VIT_00s1291g00010 I
VIT_06s0004g01800 Vitis vinifera VIT_06s0004g01800 I
VIT_07s0151g00440 Vitis vinifera VIT_07s0151g00440 I
VIT_09s0002g01370 Vitis vinifera VIT_09s0002g01370 I
AIL5 Vitis vinifera VIT_11s0052g00840 I
VIT_18s0001g08610 Vitis vinifera VIT_18s0001g08610 I
Ca_01610 Cicer arietinum Ca_01610 I
Ca_02657 Cicer arietinum Ca_02657 I
Ca_03239 Cicer arietinum Ca_03239 I
Ca_06099 Cicer arietinum Ca_06099 I
Ca_09214 Cicer arietinum Ca_09214 I
Ca_09365 Cicer arietinum Ca_09365 I
Ca_12328 Cicer arietinum Ca_12328 I
Ca_12400 Cicer arietinum Ca_12400 I
Ca_18894 Cicer arietinum Ca_18894 I
Cla000946 Citrullus lanatus Cla000946 I
Cla004613 Citrullus lanatus Cla004613 I
Cla008672 Citrullus lanatus Cla008672 I
Cla010129 Citrullus lanatus Cla010129 I
Cla012783 Citrullus lanatus Cla012783 I
Cla019120 Citrullus lanatus Cla019120 I
Cla022994 Citrullus lanatus Cla022994 I
Pm000479 Prunus mume Pm000479 I
Pm002225 Prunus mume Pm002225 I
Pm002346 Prunus mume Pm002346 I
Pm003724 Prunus mume Pm003724 I
Pm005440 Prunus mume Pm005440 I
Pm008789 Prunus mume Pm008789 I
Pm013276 Prunus mume Pm013276 I
27482.m000151 Ricinus communis 27482.m000151 I
28976.m000163 Ricinus communis 28976.m000163 I
29706.m001286 Ricinus communis 29706.m001286 I
29929.m004537 Ricinus communis 29929.m004537 I
cassava19478.valid.m1 Manihot esculenta cassava19478.valid.m1 I
cassava2127.valid.m1 Manihot esculenta cassava2127.valid.m1 I
cassava22375.valid.m1 Manihot esculenta cassava22375.valid.m1 I
cassava22409.valid.m1 Manihot esculenta cassava22409.valid.m1 I
cassava24978.valid.m1 Manihot esculenta cassava24978.valid.m1 I
cassava26059.m1 Manihot esculenta cassava26059.m1 I
cassava2757.m1 Manihot esculenta cassava2757.m1 I
cassava30540.valid.m1 Manihot esculenta cassava30540.valid.m1 I
cassava34052.m1 Manihot esculenta cassava34052.m1 I
cassava34798.m1 Manihot esculenta cassava34798.m1 I
cassava38571.m1 Manihot esculenta cassava38571.m1 I
cassava45508.m1 Manihot esculenta cassava45508.m1 I
cassava4861.m1 Manihot esculenta cassava4861.m1 I
Cucsa.065430 Cucumis sativus Cucsa.065430 I
Cucsa.092550 Cucumis sativus Cucsa.092550 I
Cucsa.103400 Cucumis sativus Cucsa.103400 I
Cucsa.192220 Cucumis sativus Cucsa.192220 I
Cucsa.260270 Cucumis sativus Cucsa.260270 I
Cucsa.277740 Cucumis sativus Cucsa.277740 I
Cucsa.353040 Cucumis sativus Cucsa.353040 I
Cucsa.395410 Cucumis sativus Cucsa.395410 I
e_gw1.131.48.1 Physcomitrella patens e_gw1.131.48.1 I
e_gw1.66.73.1 Physcomitrella patens e_gw1.66.73.1 I
e_gw1.66.94.1 Physcomitrella patens e_gw1.66.94.1 I
estExt_gwp_gw1.C_1310105 Physcomitrella patens estExt_gwp_gw1.C_1310105 I
EuGene.0000120285 Micromonas pusilla EuGene.0000120285 I
mgf002005m Mimulus guttatus mgf002005m I
mgf006398m Mimulus guttatus mgf006398m I
mgf016143m Mimulus guttatus mgf016143m I
mgf016630m Mimulus guttatus mgf016630m I
mgf018494m Mimulus guttatus mgf018494m I
mgf019708m Mimulus guttatus mgf019708m I
mgf022507m Mimulus guttatus mgf022507m I
mgf023786m Mimulus guttatus mgf023786m I
mgf025366m Mimulus guttatus mgf025366m I
mgf026162m Mimulus guttatus mgf026162m I
Aquca_006_00055 Aquilegia coerulea Aquca_006_00055 I
Aquca_009_00255 Aquilegia coerulea Aquca_009_00255 I
Aquca_010_00266 Aquilegia coerulea Aquca_010_00266 I
Aquca_017_00110 Aquilegia coerulea Aquca_017_00110 I
Aquca_058_00109 Aquilegia coerulea Aquca_058_00109 I
Aquca_096_00025 Aquilegia coerulea Aquca_096_00025 I
Bostr.0568s0236 Boechera stricta Bostr.0568s0236 I
Bostr.10273s0093 Boechera stricta Bostr.10273s0093 I
Bostr.13175s0048 Boechera stricta Bostr.13175s0048 I
Bostr.19424s0566 Boechera stricta Bostr.19424s0566 I
Bostr.26527s0471 Boechera stricta Bostr.26527s0471 I
Bostr.26675s0071 Boechera stricta Bostr.26675s0071 I
Bostr.26833s0517 Boechera stricta Bostr.26833s0517 I
Bostr.7867s1636 Boechera stricta Bostr.7867s1636 I
Cagra.0917s0035 Capsella grandiflora Cagra.0917s0035 I
Cagra.1013s0042 Capsella grandiflora Cagra.1013s0042 I
Cagra.10399s0013 Capsella grandiflora Cagra.10399s0013 I
Cagra.1085s0008 Capsella grandiflora Cagra.1085s0008 I
Cagra.2093s0009 Capsella grandiflora Cagra.2093s0009 I
Cagra.2848s0022 Capsella grandiflora Cagra.2848s0022 I
Cagra.4290s0005 Capsella grandiflora Cagra.4290s0005 I
Cagra.6170s0013 Capsella grandiflora Cagra.6170s0013 I
Carubv10000560m.g Capsella rubella Carubv10000560m.g I
Carubv10002745m.g Capsella rubella Carubv10002745m.g I
Carubv10004485m.g Capsella rubella Carubv10004485m.g I
Carubv10012248m.g Capsella rubella Carubv10012248m.g I
Carubv10015558m.g Capsella rubella Carubv10015558m.g I
Carubv10021893m.g Capsella rubella Carubv10021893m.g I
Carubv10026181m.g Capsella rubella Carubv10026181m.g I
Carubv10026295m.g Capsella rubella Carubv10026295m.g I
Ciclev10007849m.g Citrus clementina Ciclev10007849m.g I
Ciclev10013851m.g Citrus clementina Ciclev10013851m.g I
Ciclev10014809m.g Citrus clementina Ciclev10014809m.g I
Ciclev10025111m.g Citrus clementina Ciclev10025111m.g I
Ciclev10025181m.g Citrus clementina Ciclev10025181m.g I
Ciclev10025339m.g Citrus clementina Ciclev10025339m.g I
Eucgr.B01460 Eucalyptus grandis Eucgr.B01460 I
Eucgr.C02333 Eucalyptus grandis Eucgr.C02333 I
Eucgr.F00098 Eucalyptus grandis Eucgr.F00098 I
Eucgr.F02223 Eucalyptus grandis Eucgr.F02223 I
Eucgr.F04421 Eucalyptus grandis Eucgr.F04421 I
Eucgr.H02335 Eucalyptus grandis Eucgr.H02335 I
Eucgr.I00564 Eucalyptus grandis Eucgr.I00564 I
Eucgr.J00792 Eucalyptus grandis Eucgr.J00792 I
evm.TU.supercontig_160.33 Carica papaya evm.TU.supercontig_160.33 I
evm.TU.supercontig_233.1 Carica papaya evm.TU.supercontig_233.1 I
evm.TU.supercontig_25.116 Carica papaya evm.TU.supercontig_25.116 I
evm.TU.supercontig_55.15 Carica papaya evm.TU.supercontig_55.15 I
evm.TU.supercontig_84.82 Carica papaya evm.TU.supercontig_84.82 I
gene02623-v1.0-hybrid Fragaria vesca gene02623-v1.0-hybrid I
gene05644-v1.0-hybrid Fragaria vesca gene05644-v1.0-hybrid I
gene07424-v1.0-hybrid Fragaria vesca gene07424-v1.0-hybrid I
gene20607-v1.0-hybrid Fragaria vesca gene20607-v1.0-hybrid I
gene20828-v1.0-hybrid Fragaria vesca gene20828-v1.0-hybrid I
gene21524-v1.0-hybrid Fragaria vesca gene21524-v1.0-hybrid I
Gorai.001G140000 Gossypium raimondii Gorai.001G140000 I
Gorai.003G037100 Gossypium raimondii Gorai.003G037100 I
Gorai.004G099100 Gossypium raimondii Gorai.004G099100 I
Gorai.004G263900 Gossypium raimondii Gorai.004G263900 I
Gorai.006G129400 Gossypium raimondii Gorai.006G129400 I
Gorai.007G226500 Gossypium raimondii Gorai.007G226500 I
Gorai.008G086000 Gossypium raimondii Gorai.008G086000 I
Gorai.010G028100 Gossypium raimondii Gorai.010G028100 I
Gorai.011G109500 Gossypium raimondii Gorai.011G109500 I
Gorai.012G011800 Gossypium raimondii Gorai.012G011800 I
Lus10002657.g Linum usitatissimum Lus10002657.g I
Lus10007719.g Linum usitatissimum Lus10007719.g I
Lus10012728.g Linum usitatissimum Lus10012728.g I
Lus10018655.g Linum usitatissimum Lus10018655.g I
Lus10024101.g Linum usitatissimum Lus10024101.g I
Lus10031260.g Linum usitatissimum Lus10031260.g I
Lus10031831.g Linum usitatissimum Lus10031831.g I
Lus10037670.g Linum usitatissimum Lus10037670.g I
Lus10041618.g Linum usitatissimum Lus10041618.g I
MDP0000121984 Malus domestica MDP0000121984 I
MDP0000125317 Malus domestica MDP0000125317 I
MDP0000142490 Malus domestica MDP0000142490 I
MDP0000175309 Malus domestica MDP0000175309 I
MDP0000182395 Malus domestica MDP0000182395 I
MDP0000187703 Malus domestica MDP0000187703 I
MDP0000188698 Malus domestica MDP0000188698 I
MDP0000190889 Malus domestica MDP0000190889 I
MDP0000211931 Malus domestica MDP0000211931 I
MDP0000277643 Malus domestica MDP0000277643 I
MDP0000287973 Malus domestica MDP0000287973 I
MDP0000801540 Malus domestica MDP0000801540 I
MDP0000824178 Malus domestica MDP0000824178 I
MDP0000871080 Malus domestica MDP0000871080 I
orange1.1g005737m.g Citrus sinensis orange1.1g005737m.g I
orange1.1g010039m.g Citrus sinensis orange1.1g010039m.g I
orange1.1g014204m.g Citrus sinensis orange1.1g014204m.g I
orange1.1g038243m.g Citrus sinensis orange1.1g038243m.g I
orange1.1g041657m.g Citrus sinensis orange1.1g041657m.g I
orange1.1g044828m.g Citrus sinensis orange1.1g044828m.g I
Pavir.Aa01355 Panicum virgatum Pavir.Aa01355 I
Pavir.Ba03911 Panicum virgatum Pavir.Ba03911 I
Pavir.Bb00216 Panicum virgatum Pavir.Bb00216 I
Pavir.Da00344 Panicum virgatum Pavir.Da00344 I
Pavir.Db00529 Panicum virgatum Pavir.Db00529 I
Pavir.Ga00050 Panicum virgatum Pavir.Ga00050 I
Pavir.Gb00275 Panicum virgatum Pavir.Gb00275 I
Pavir.Hb01059 Panicum virgatum Pavir.Hb01059 I
Pavir.Ia00425 Panicum virgatum Pavir.Ia00425 I
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I
Pavir.Ia03990 Panicum virgatum Pavir.Ia03990 I
Pavir.Ia04350 Panicum virgatum Pavir.Ia04350 I
Pavir.Ib00475 Panicum virgatum Pavir.Ib00475 I
Pavir.Ib00501 Panicum virgatum Pavir.Ib00501 I
Pavir.Ib00946 Panicum virgatum Pavir.Ib00946 I
Pavir.J01327 Panicum virgatum Pavir.J01327 I
Pavir.J03057 Panicum virgatum Pavir.J03057 I
Pavir.J07914 Panicum virgatum Pavir.J07914 I
Pavir.J24038 Panicum virgatum Pavir.J24038 I
SapurV1A.0004s0270 Salix purpurea SapurV1A.0004s0270 I
SapurV1A.0009s0500 Salix purpurea SapurV1A.0009s0500 I
SapurV1A.0164s0340 Salix purpurea SapurV1A.0164s0340 I
SapurV1A.0166s0150 Salix purpurea SapurV1A.0166s0150 I
SapurV1A.0235s0250 Salix purpurea SapurV1A.0235s0250 I
SapurV1A.0313s0010 Salix purpurea SapurV1A.0313s0010 I
SapurV1A.0445s0060 Salix purpurea SapurV1A.0445s0060 I
SapurV1A.0513s0060 Salix purpurea SapurV1A.0513s0060 I
SapurV1A.0557s0200 Salix purpurea SapurV1A.0557s0200 I
SapurV1A.0608s0160 Salix purpurea SapurV1A.0608s0160 I
SapurV1A.0764s0140 Salix purpurea SapurV1A.0764s0140 I
SapurV1A.1279s0010 Salix purpurea SapurV1A.1279s0010 I
SapurV1A.1889s0010 Salix purpurea SapurV1A.1889s0010 I
Thhalv10005529m.g Eutrema salsugineum Thhalv10005529m.g I
Thhalv10011353m.g Eutrema salsugineum Thhalv10011353m.g I
Thhalv10013081m.g Eutrema salsugineum Thhalv10013081m.g I
Thhalv10013143m.g Eutrema salsugineum Thhalv10013143m.g I
Thhalv10015354m.g Eutrema salsugineum Thhalv10015354m.g I
Thhalv10019625m.g Eutrema salsugineum Thhalv10019625m.g I
Thhalv10020382m.g Eutrema salsugineum Thhalv10020382m.g I
Thhalv10024807m.g Eutrema salsugineum Thhalv10024807m.g I
PK01265.1 Cannabis sativa PK01265.1 I
PK05767.1 Cannabis sativa PK05767.1 I
PK11841.1 Cannabis sativa PK11841.1 I
PK14410.1 Cannabis sativa PK14410.1 I
PK26651.1 Cannabis sativa PK26651.1 I
chr3.CM0602.440.nd Lotus japonicus chr3.CM0602.440.nd I
chr3.LjT37F23.80.nd Lotus japonicus chr3.LjT37F23.80.nd I
LjSGA_004480.1 Lotus japonicus LjSGA_004480.1 I
LjT30N18.260.nd Lotus japonicus LjT30N18.260.nd I
Carubv10010918m.g Capsella rubella Carubv10010918m.g N
Carubv10020688m.g Capsella rubella Carubv10020688m.g N
MDP0000166059 Malus domestica MDP0000166059 N