nhr-21 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003620 T306145_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.925 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F21D12.1a.1 Nuclear receptor 28 97
F21D12.1a.2 Nuclear receptor 28 97
F21D12.1b.1 Nuclear receptor 19 49
F21D12.1b.2 Nuclear receptor 19 49
F21D12.1c.1 Nuclear receptor 20 89
F21D12.1c.2 Nuclear receptor 20 89
F21D12.1c.3 Nuclear receptor 20 89
F21D12.1d.1 Nuclear receptor 28 97
F21D12.1d.2 Nuclear receptor 28 97
F21D12.1e.1 Nuclear receptor 28 97
F21D12.1e.2 Nuclear receptor 28 97

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS02G0728001 Oryza sativa OS02G0728001 D
OS09G0474000 Oryza sativa OS09G0474000 I
ONIVA02G34180 Oryza nivara ONIVA02G34180 I
ONIVA08G20730 Oryza nivara ONIVA08G20730 I
ONIVA09G14270 Oryza nivara ONIVA09G14270 I
OPUNC02G28720 Oryza punctata OPUNC02G28720 I
OPUNC08G16670 Oryza punctata OPUNC08G16670 I
OPUNC09G12140 Oryza punctata OPUNC09G12140 I
OPUNC09G12240 Oryza punctata OPUNC09G12240 I
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I
OS08G0487100 Oryza sativa OS08G0487100 I
OMERI08G14760 Oryza meridionalis OMERI08G14760 I
Sb02g027410 Sorghum bicolor Sb02g027410 I
Sb07g028900 Sorghum bicolor Sb07g028900 I
Sb07g028960 Sorghum bicolor Sb07g028960 I
Si014433m.g Setaria italica Si014433m.g I
Si019897m.g Setaria italica Si019897m.g I
Si031238m.g Setaria italica Si031238m.g I
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I
Ca_09362 Cicer arietinum Ca_09362 I
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I
Pavir.Fb01824 Panicum virgatum Pavir.Fb01824 I
OMERI02G29910 Oryza meridionalis OMERI02G29910 I
BGIOSGA008968 Oryza indica BGIOSGA008968 I
BGIOSGA026766 Oryza indica BGIOSGA026766 I
BGIOSGA029595 Oryza indica BGIOSGA029595 I
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I
GLYMA01G40370 Glycine max GLYMA01G40370 I
GLYMA11G04920 Glycine max GLYMA11G04920 I
GLYMA17G17100 Glycine max GLYMA17G17100 I
GRMZM2G020799 Zea mays GRMZM2G020799 I
GRMZM2G144480 Zea mays GRMZM2G144480 I
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I
LPERR08G15570 Leersia perrieri LPERR08G15570 I
LPERR09G10020 Leersia perrieri LPERR09G10020 I
MLOC_62430 Hordeum vulgare MLOC_62430 I
OBART09G13750 Oryza barthii OBART09G13750 I
AC186606.4_FG003 Zea mays AC186606.4_FG003 I
OLONG_013604 Oryza longistaminata OLONG_013604 I
OLONG_004835 Oryza longistaminata OLONG_004835 I
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I
OBART09G13760 Oryza barthii OBART09G13760 I
MTR_5g015090 Medicago truncatula MTR_5g015090 I
OBART08G18720 Oryza barthii OBART08G18720 I
OBART02G31030 Oryza barthii OBART02G31030 I
OB09G20300 Oryza brachyantha OB09G20300 I
GRMZM2G137532 Zea mays GRMZM2G137532 N
GRMZM2G358796 Zea mays GRMZM2G358796 N
BRADI3G38840 Brachypodium distachyon BRADI3G38840 N
OB08G25840 Oryza brachyantha OB08G25840 N
MLOC_6062 Hordeum vulgare MLOC_6062 N