CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nhr-96
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003686
T306208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG01240
M02390_2.00
Caenorhabditis briggsae
BTGTGWCB
VGWCACAV
PBM
Weirauch et al.(2014)
pTH6003
0.836
0.643
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F44C8.11
Nuclear receptor
5
74
GLCAVCGQVTTGKNFGVISCRSCAAFFRRAPTWSRRFPECVKASCAIFENGKFKCKKCRLKRCQEVGMDV
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_18193
Wuchereria bancrofti
WUBG_18193
N
0.000
EVEC_0000095301
Enterobius vermicularis
EVEC_0000095301
N
0.000
scaffold157-EXSNAP2012.14
Pristionchus exspectatus
scaffold157-EXSNAP2012.14
N
0.000
scaffold498-EXSNAP2012.10
Pristionchus exspectatus
scaffold498-EXSNAP2012.10
N
0.000
SMUV_0000151901
Syphacia muris
SMUV_0000151901
N
0.000