Afo_R009341 (Aptenodytes forsteri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Afo_R009341 T306493_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.794 0.786
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.794 0.786
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.794 0.786
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.794 0.786
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.794 0.786
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.794 0.786
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.794 0.786
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.794 0.786
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.794 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009341 Nuclear receptor 13 68

Links

Other Nuclear receptor family TFs
Other Aptenodytes forsteri TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.794
NR2E1 Homo sapiens ENSG00000112333 D 0.794
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.794
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.794
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.794
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.794
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.794
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.794
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.794
NR2E1 Sorex araneus ENSSARG00000013555 I 0.794
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.794
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.794
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.782
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.794
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.794
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.782
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.794
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.782
NR2E1 Ochotona princeps ENSOPRG00000012229 I 0.806
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.794
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.797
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.797
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.794
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.794
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.776
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.794
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.794
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.794
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.782
Aan_R007044 Calypte anna Aan_R007044 I 0.794
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.747
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.747
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.757
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.782
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.794
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.794
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.794
NR2E1 Gallus gallus ENSGALG00000015305 I 0.794
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.782
NR2E1 Felis catus ENSFCAG00000002255 I 0.794
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.794
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.794
NR2E1 Equus caballus ENSECAG00000018990 I 0.794
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.794
nr2e1 Danio rerio ENSDARG00000017107 I 0.780
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.794
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.794
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.794
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.794
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.794
NR2E1 Bos taurus ENSBTAG00000013991 I 0.794
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.794
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.794
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.782
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.794
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.782
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.782
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.794
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.794
ENSMGAG00000014050 Meleagris gallopavo ENSMGAG00000014050 I 0.806
NR2E1 Microcebus murinus ENSMICG00000014274 I 0.806
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.794
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.794
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.794
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.794
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.794
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.794
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.794
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.794