CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Myotis_brandtii_NR2E3_10027281
(
Myotis brandtii
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Myotis_brandtii_NR2E3_10027281
T306806_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.987
0.971
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.987
0.971
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.987
0.971
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.987
0.957
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.985
0.957
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.983
0.957
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN
NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.980
0.957
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.977
0.857
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.977
0.857
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_NR2E3_10027281
Nuclear receptor
33
103
LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQEGMNQ
Links
Other
Nuclear receptor
family TFs
Other
Myotis brandtii
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_110346
Ceriporiopsis subvermispora
CERSUDRAFT_110346
N
JAAARDRAFT_29820
Jaapia argillacea
JAAARDRAFT_29820
N
PISMIDRAFT_589784
Pisolithus microcarpus
PISMIDRAFT_589784
N
PLEOSDRAFT_38448
Pleurotus ostreatus
PLEOSDRAFT_38448
N
SERLA73DRAFT_104923
Serpula lacrymans
SERLA73DRAFT_104923
N