CBG23697_CONSTRUCT (PBM CONSTRUCTS)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 CBG23697_CONSTRUCT T306948_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG23697_CONSTRUCT
M01299_2.00		 PBM CONSTRUCTS
NNTKTGTGTYN
NRACACAMANN		 PBM
Lambert et al.(2019)
pTH11459		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01299_2.00 Nuclear receptor 11 74

DNA Binding Domains

Protein ID Domain From To Sequence
CBG23697_CONSTRUCT Nuclear receptor 11 74

Links

Other Nuclear receptor family TFs
Other PBM CONSTRUCTS TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018332 Oryza indica BGIOSGA018332 N
OBART05G10920 Oryza barthii OBART05G10920 N
OGLUM05G11530 Oryza glumaepatula OGLUM05G11530 N
ONIVA05G11290 Oryza nivara ONIVA05G11290 N
OPUNC05G09320 Oryza punctata OPUNC05G09320 N
ORGLA05G0094200 Oryza glaberrima ORGLA05G0094200 N
ORUFI05G11790 Oryza rufipogon ORUFI05G11790 N
OS05G0305700 Oryza sativa OS05G0305700 N
Si023090m.g Setaria italica Si023090m.g N
Cucsa.095530 Cucumis sativus Cucsa.095530 N