CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMU15000579
(
Schmidtea mediterranea
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMU15000579
T307181_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15000579
Nuclear receptor
149
219
KKCKVCFDKAVNQNFGVLSCESCKAFFRRNAIRSSPLKCSNGTDLCSVTSSTRKQCPSCRLKKCLQVGMRS
Links
Other
Nuclear receptor
family TFs
Other
Schmidtea mediterranea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014742
Oryza indica
BGIOSGA014742
N
OBART06G21450
Oryza barthii
OBART06G21450
N
ONIVA04G16720
Oryza nivara
ONIVA04G16720
N
ONIVA05G05380
Oryza nivara
ONIVA05G05380
N
ORGLA01G0122800
Oryza glaberrima
ORGLA01G0122800
N
ORGLA06G0177400
Oryza glaberrima
ORGLA06G0177400
N
ORUFI05G05300
Oryza rufipogon
ORUFI05G05300
N
OS01G0353633
Oryza sativa
OS01G0353633
N
OS04G0510000
Oryza sativa
OS04G0510000
N
OS05G0175450
Oryza sativa
OS05G0175450
N