CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACAC_0001297301
(
Angiostrongylus cantonensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ACAC_0001297301
T307910_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.977
0.700
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.947
0.643
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACAC_0001297301-mRNA-1
Nuclear receptor
13
82
ELCFVCQDISTGYHYGVPSCNGCKTFFRRTIMKNQNFVCQNAGTCPVDKSIRCACRHCRFEKCVQVGMNR
Links
Other
Nuclear receptor
family TFs
Other
Angiostrongylus cantonensis
TFs
274 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g14860
Steinernema scapterisci
L892_g14860
I
L893_g3995
Steinernema glaseri
L893_g3995
I
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
ECANG7_07258
Echinococcus canadensis
ECANG7_07258
N
EmuJ_001198700
Echinococcus multilocularis
EmuJ_001198700
N
HmN_000196100
Hymenolepis microstoma
HmN_000196100
N
SSLN_0000732501
Schistocephalus solidus
SSLN_0000732501
N
SVE_0817200
Strongyloides venezuelensis
SVE_0817200
N
TASK_0000504901
Taenia asiatica
TASK_0000504901
N
TsM_000521300
Taenia solium
TsM_000521300
N