ACOC_0000869501 (Angiostrongylus costaricensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ACOC_0000869501 T307930_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.935 0.671
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.802 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000869501-mRNA-1 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Angiostrongylus costaricensis TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI082585 Acyrthosiphon pisum ACYPI082585 N
ACYPI42990 Acyrthosiphon pisum ACYPI42990 N
ACYPI44934 Acyrthosiphon pisum ACYPI44934 N
ACYPI50388 Acyrthosiphon pisum ACYPI50388 N
ACYPI52772 Acyrthosiphon pisum ACYPI52772 N
LDEC001006 Leptinotarsa decemlineata LDEC001006 N
LDEC001312 Leptinotarsa decemlineata LDEC001312 N
LDEC012423 Leptinotarsa decemlineata LDEC012423 N
LDEC018138 Leptinotarsa decemlineata LDEC018138 N
LDEC022616 Leptinotarsa decemlineata LDEC022616 N
LDEC023206 Leptinotarsa decemlineata LDEC023206 N
LDEC024653 Leptinotarsa decemlineata LDEC024653 N