CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf00453-processed-gene-0.1
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
augustus_masked-nMf.1.1.scaf00453-processed-gene-0.1
T308191_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf00453-processed-gene-0.1-mRNA-1
Nuclear receptor
12
79
LFCVICGNQSESRNYCVISCASCKQFFRRTVVQQKVTTCRRHKTCDLKTGEKCRGCRLDKCLIEGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI000452
Anopheles epiroticus
AEPI000452
N
ASTEI01186
Anopheles stephensi
ASTEI01186
N
ASIS020896
Anopheles sinensis
ASIS020896
N
AQUA002445
Anopheles quadriannulatus
AQUA002445
N
AMIN005831
Anopheles minimus
AMIN005831
N
AMEM003061
Anopheles merus
AMEM003061
N
AMEC011775
Anopheles melas
AMEC011775
N
AMAM001598
Anopheles maculatus
AMAM001598
N
AFUN011480
Anopheles funestus
AFUN011480
N
AFAF004505
Anopheles farauti
AFAF004505
N
CpipJ_CPIJ018046
Culex pipiens
CpipJ_CPIJ018046
N
ADIR000929
Anopheles dirus
ADIR000929
N
ACUA023753
Anopheles culicifacies
ACUA023753
N
AATE000800
Anopheles atroparvus
AATE000800
N
AARA002564
Anopheles arabiensis
AARA002564
N
GJ15598
Drosophila virilis
FBgn0202788
N
CPIJ018046
Culex quinquefasciatus
CPIJ018046
N
AGAP000878
Anopheles gambiae
AGAP000878
N
AAEL006817
Aedes aegypti
AAEL006817
N