nLs.2.1.2.g05858 (Litomosoides sigmodontis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nLs.2.1.2.g05858 T309841_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.992 0.929
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05858-RA Nuclear receptor 110 179

Links

Other Nuclear receptor family TFs
Other Litomosoides sigmodontis TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VHR2 Saccharomyces cerevisiae YER064C D
VHR1 Saccharomyces cerevisiae YIL056W D
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I
6292_YER064C Saccharomyces paradoxus 6292_YER064C I
6651_YER064C Saccharomyces mikatae 6651_YER064C I
7027_YER064C Saccharomyces bayanus 7027_YER064C I
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I
Kwal_5842 Kluyveromyces waltii Kwal_5842 I
SAKL0F08734g Lachancea kluyveri SAKL0F08734g I
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I
CAGL0J03014g Candida glabrata CAGL0J03014g I
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I
NDAI_0E04810 Naumovozyma dairenensis NDAI_0E04810 I
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I
SU7_1620 Saccharomyces arboricola SU7_1620 I
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I