SSLN_0001329801 (Schistocephalus solidus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SSLN_0001329801 T310568_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.980 0.743
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.980 0.743
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.980 0.743
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.980 0.743
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.980 0.743
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.980 0.743
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.980 0.743
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.980 0.743
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.922 0.743
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.922 0.743
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.922 0.743
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.922 0.743
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.922 0.743
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.922 0.743
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.922 0.743
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.922 0.743
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.922 0.743
dsf
M06431_2.00 		Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT		 B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381 		0.850 0.686
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.745 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0001329801-mRNA-1 Nuclear receptor 26 109

Links

Other Nuclear receptor family TFs
Other Schistocephalus solidus TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP009481 Anopheles gambiae AGAP009481 N
AGAP009484 Anopheles gambiae AGAP009484 N
tetur12g04510 Tetranychus urticae tetur12g04510 N
ACHR001634 Anopheles christyi ACHR001634 N
ACHR009283 Anopheles christyi ACHR009283 N
AMEC011097 Anopheles melas AMEC011097 N
AMEC021023 Anopheles melas AMEC021023 N
ASIS003105 Anopheles sinensis ASIS003105 N