CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001496301
(
Strongylus vulgaris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SVUK_0001496301
T310706_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001496301-mRNA-1
Nuclear receptor
186
256
PPCAICGDPATGIHFGADSCAACSAFFRRTVTINRKFECIGDSSTNCSNLKGSSSCKKCRFEKCVSVGMDI
Links
Other
Nuclear receptor
family TFs
Other
Strongylus vulgaris
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000024801
Astyanax mexicanus
ENSAMXG00000024801
N
ENSAMXG00000024802
Astyanax mexicanus
ENSAMXG00000024802
N
her4.4
Danio rerio
ENSDARG00000009822
N
her4.2
Danio rerio
ENSDARG00000056729
N
her4.1
Danio rerio
ENSDARG00000056732
N
her4.3
Danio rerio
ENSDARG00000070770
N
her4.2
Danio rerio
ENSDARG00000094426
N
AAI57610
Xenopus tropicalis
AAI57610
N