TTRE_0000285101 (Trichuris trichiura)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 TTRE_0000285101 T310943_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
O77476_BRUPA
M02422_2.00 		Brugia pahangi
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6019 		0.989 0.900
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.976 0.686
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.976 0.729
Hr78
M06430_2.00 		Drosophila melanogaster
HVAGGTCA
TGACCTBD		 B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239 		0.974 0.786
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.974 0.757
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.974 0.757
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.974 0.757
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.974 0.757
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.974 0.757
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.974 0.757
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.974 0.757
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.974 0.757
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.969 0.643
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.969 0.643
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.969 0.643
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.969 0.643
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.969 0.643
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.969 0.643
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.969 0.643
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.969 0.643
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.969 0.643
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.969 0.643
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.969 0.643
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.969 0.643
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.969 0.643
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.969 0.643
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.968 0.643
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.968 0.643
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.968 0.643
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.968 0.643
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.968 0.643
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.968 0.643
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.968 0.643
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.968 0.643
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.967 0.643
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.967 0.643
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.967 0.643
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.967 0.643
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.967 0.643
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.967 0.643
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.967 0.643
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.967 0.643
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.967 0.643
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.967 0.643
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.967 0.643
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.967 0.643
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.967 0.643
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.967 0.643
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.967 0.643
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.967 0.643
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.967 0.643
Nr2c2
M09303_2.00 		Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY		 Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A 		0.966 0.743
NR2C2
M03407_2.00 		Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB		 SELEX
Jolma et al.(2013)
NR2C2_1 		0.966 0.729
NR2C2
M05669_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX 		0.966 0.729
NR2C2
M08156_2.00 		Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0504.1 		0.966 0.729
NR2C2
M07990_2.00 		Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD 		0.966 0.729
NR2C2
M07991_2.00 		Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH		 ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD 		0.966 0.729
NR2C2
M07992_2.00 		Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD 		0.966 0.729
NR2C2
M08221_2.00 		Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH		 ChIP-seq
Contrino et al.(2012)
Mv97 		0.966 0.729
NR2C2
M08222_2.00 		Homo sapiens
TCARAGGTCA
TGACCTYTGA		 ChIP-seq
Contrino et al.(2012)
Mv98 		0.966 0.729
NR2C2
M09292_2.00 		Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY		 Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B 		0.966 0.729
NR2C2
M09611_2.00 		Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY		 Misc
Heinz et al.(2010)
Hela-TR4_GSE24685 		0.966 0.729
NR2C2
M11173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_03 		0.966 0.729
NR2C2
M11174_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_04 		0.966 0.729
NR2C2
M11175_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_01 		0.966 0.729
NR2C2
M11176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_03 		0.966 0.729
NR2C2
M11177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2_01 		0.966 0.729
NR2C2
M11178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2 		0.966 0.729
NR2C2
M11179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q3 		0.966 0.729
NR2C2
M05670_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX 		0.966 0.729
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.965 0.643
Eip75B
M03928_2.00 		Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK		 SELEX
Nitta et al.(2015)
Eip75B_1 		0.964 0.643
Eip75B
M03929_2.00 		Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT		 SELEX
Nitta et al.(2015)
Eip75B_2 		0.964 0.643
Eip75B
M06416_2.00 		Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM		 B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568 		0.964 0.643
Eip78C
M06427_2.00 		Drosophila melanogaster
RGGTCA
TGACCY		 B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865 		0.960 0.643
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.959 0.629
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.959 0.614
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.954 0.629
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.954 0.629
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.954 0.629
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.954 0.571
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.954 0.571
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.954 0.571
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.954 0.571
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.954 0.571
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.954 0.571
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.954 0.571
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.954 0.571
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.954 0.571
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.954 0.571
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.954 0.571
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.954 0.571
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.954 0.571
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.954 0.571
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.954 0.571
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.954 0.571
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.954 0.571
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.954 0.571
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.954 0.571
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.954 0.571
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.954 0.571
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.954 0.571
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.948 0.557
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.948 0.557
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.948 0.557
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.948 0.557
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.948 0.557
Rara
M00185_2.00 		Mus musculus
NRGGTCAN
NTGACCYN		 PBM
Badis et al.(2009)
Rara_1051 		0.944 0.557
RARA
M03369_2.00 		Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY		 SELEX
Jolma et al.(2013)
RARA_1 		0.944 0.557
RARA
M03370_2.00 		Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
RARA_2 		0.944 0.557
RARA
M03371_2.00 		Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT		 SELEX
Jolma et al.(2013)
RARA_3 		0.944 0.557
RARA
M03372_2.00 		Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT		 SELEX
Jolma et al.(2013)
RARA_4 		0.944 0.557
RARA
M03373_2.00 		Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW		 SELEX
Jolma et al.(2013)
RARA_5 		0.944 0.557
RARA
M03374_2.00 		Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT		 SELEX
Jolma et al.(2013)
RARA_6 		0.944 0.557
Rara
M03432_2.00 		Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT		 SELEX
Jolma et al.(2013)
Rara_1 		0.944 0.557
Rara
M03433_2.00 		Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT		 SELEX
Jolma et al.(2013)
Rara_2 		0.944 0.557
Rara
M03434_2.00 		Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
Rara_3 		0.944 0.557
RARA
M05607_2.00 		Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1 		0.944 0.557
RARA
M05608_2.00 		Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2 		0.944 0.557
RARA
M05609_2.00 		Homo sapiens
NRRGGTCANV
BNTGACCYYN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3 		0.944 0.557
RARA
M05878_2.00 		Homo sapiens
RAGGTCA
TGACCTY		 SMiLE-seq
Isakova et al.(2017)
RARa 		0.944 0.557
RARA
M09277_2.00 		Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY		 Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A 		0.944 0.557
Rara
M09329_2.00 		Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY		 Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A 		0.944 0.557
RARA
M11137_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B1_Q6 		0.944 0.557
RARA
M05610_2.00 		Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1 		0.944 0.557
RARA
M05611_2.00 		Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2 		0.944 0.557
RARA
M05612_2.00 		Homo sapiens
NRAGGTCANN
NNTGACCTYN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3 		0.944 0.557
Rarb
M02401_2.00 		Mus musculus
NRRGGTCAHN
NDTGACCYYN		 PBM
Weirauch et al.(2014)
pTH2804 		0.943 0.557
RARB
M03355_2.00 		Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT		 SELEX
Jolma et al.(2013)
RARB_1 		0.943 0.557
Rarb
M03423_2.00 		Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW		 SELEX
Jolma et al.(2013)
Rarb_1 		0.943 0.557
Rarb
M03424_2.00 		Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY		 SELEX
Jolma et al.(2013)
Rarb_2 		0.943 0.557
Rarb
M03425_2.00 		Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT		 SELEX
Jolma et al.(2013)
Rarb_3 		0.943 0.557
RARB
M05563_2.00 		Homo sapiens
NHAAGGTCAN
NTGACCTTDN		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1 		0.943 0.557
RARB
M05564_2.00 		Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2 		0.943 0.557
RARB
M05565_2.00 		Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3 		0.943 0.557
RARB
M11094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B2_Q6 		0.943 0.557
RARB
M05566_2.00 		Homo sapiens
NHRAGGTCAH
DTGACCTYDN		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1 		0.943 0.557
RARB
M05567_2.00 		Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2 		0.943 0.557
RARB
M05568_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3 		0.943 0.557
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.930 0.543
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.930 0.543
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.929 0.557
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.929 0.557
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.929 0.557
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.929 0.557
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.929 0.557
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.929 0.557
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.926 0.643
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.926 0.643
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.926 0.643
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.926 0.643
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.926 0.643
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.926 0.643
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.926 0.643
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.926 0.643
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.926 0.643
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.925 0.614
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.925 0.614
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.925 0.614
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.925 0.614
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.925 0.614
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.925 0.614
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.925 0.614
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.925 0.614
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.925 0.614
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.925 0.614
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.925 0.614
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.925 0.614
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.925 0.614
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.925 0.614
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.925 0.614
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.922 0.614
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.922 0.614
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.922 0.614
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.922 0.614
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.922 0.614
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.922 0.614
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.922 0.543
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.922 0.543
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.922 0.543
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.922 0.543
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.922 0.543
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.922 0.543
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.922 0.543
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.922 0.543
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.922 0.614
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.922 0.614
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.922 0.614
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.922 0.614
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.922 0.614
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.922 0.614
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.922 0.614
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.922 0.614
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.922 0.614
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.922 0.614
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.922 0.614
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.922 0.614
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.922 0.614
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.920 0.529
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.916 0.529
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.916 0.529
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.916 0.529
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.916 0.529
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.916 0.529
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.916 0.529
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.916 0.529
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.916 0.529
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.916 0.529
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.916 0.529
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.916 0.529
Nr1h2
M09620_2.00 		Mus musculus
RGGTYACTNNAGGTCA
TGACCTNNAGTRACCY		 Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512 		0.905 0.586
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.904 0.586
PPARD
M05581_2.00 		Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1 		0.877 0.586
PPARD
M05582_2.00 		Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2 		0.877 0.586
PPARD
M05583_2.00 		Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1 		0.877 0.586
PPARD
M05584_2.00 		Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2 		0.877 0.586
Nr1h3
M09301_2.00 		Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB		 Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A 		0.867 0.571
NR1H3
M09264_2.00 		Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN		 Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B 		0.867 0.557
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.862 0.529
PPARA
M09295_2.00 		Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN		 Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B 		0.862 0.557
Ppara
M09314_2.00 		Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD		 Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A 		0.862 0.557
PPARA
M11183_2.00 		Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG		 Transfac
Matys et al.(2006)
V$PPARA_01 		0.862 0.557
PPARA
M11184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARA_Q6 		0.862 0.557
Pparg
M05884_2.00 		Mus musculus
HWNTRGGKYANB
VNTRMCCYANWD		 SMiLE-seq
Isakova et al.(2017)
PPARg 		0.852 0.571
PPARG
M02707_2.00 		Homo sapiens
STRGGTCANNDTGACCYANW
WNTRGGTCAHNNTGACCYAS		 SELEX
Mathelier et al.(2014)
MA0066.1 		0.852 0.571
PPARG
M09278_2.00 		Homo sapiens
VWSKRGGKSARAGGKSA
TSMCCTYTSMCCYMSWB		 Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A 		0.852 0.571
Pparg
M09299_2.00 		Mus musculus
HWBTRGGBSARAGGKNA
TNMCCTYTSVCCYAVWD		 Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A 		0.852 0.571
Pparg
M09612_2.00 		Mus musculus
TRGGNCARAGGKCA
TGMCCTYTGNCCYA		 Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511 		0.852 0.571
PPARG
M11138_2.00 		Homo sapiens
NNDRRGGTCAAAGGTCAHVND
HNBDTGACCTTTGACCYYHNN		 Transfac
Matys et al.(2006)
V$PPARG_01 		0.852 0.571
PPARG
M11139_2.00 		Homo sapiens
AWBTRGGTCACNDTGACCTASTT
AASTAGGTCAHNGTGACCYAVWT		 Transfac
Matys et al.(2006)
V$PPARG_02 		0.852 0.571
PPARG
M11140_2.00 		Homo sapiens
WWBHRGGNYAAAGKTCA
TGAMCTTTRNCCYDVWW		 Transfac
Matys et al.(2006)
V$PPARG_03 		0.852 0.571
PPARG
M11141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARG_Q6 		0.852 0.571
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.851 0.586
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.851 0.586
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.851 0.586
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.851 0.586
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.851 0.586
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.840 0.514
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.836 0.586
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.809 0.586
NR1D1
M05605_2.00 		Homo sapiens
NWWNTRGGTYASTRGGTCAN
NTGACCYASTRACCYANWWN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX 		0.795 0.557
NR1D1
M09276_2.00 		Homo sapiens
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B 		0.795 0.557
Nr1d1
M09310_2.00 		Mus musculus
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A 		0.795 0.557
NR1D1
M11136_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6 		0.795 0.557
NR1D1
M05606_2.00 		Homo sapiens
NAWNKRGGTYAGTRGGTCRN
NYGACCYACTRACCYMNWTN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX 		0.795 0.557
NR1D2
M05659_2.00 		Homo sapiens
DWWNKRKGTYANTRKGTYRN
NYRACMYANTRACMYMNWWH		 SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX 		0.791 0.557
Nr1d2
M09313_2.00 		Mus musculus
NVRDVWVTRRGTCANDVDN
NHBHNTGACYYABWBHYBN		 Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A 		0.791 0.557
NR1D2
M05660_2.00 		Homo sapiens
NWWNBRGGKYAVTRGGKCRN
NYGMCCYABTRMCCYVNWWN		 SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX 		0.791 0.557
NR1H4
M00368_2.00 		Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF 		0.770 0.557
NR1H4
M05876_2.00 		Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4 		0.770 0.557
NR1H4
M08152_2.00 		Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1 		0.770 0.557
NR1H4
M09263_2.00 		Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B 		0.770 0.557
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.770 0.557
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.770 0.557
NR1H4
M11086_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2 		0.770 0.557
NR1H4
M11087_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3 		0.770 0.557
NR1H4
M11088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5 		0.770 0.557
NR1H4
M11089_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5 		0.770 0.557
NR1H4
M00367_2.00 		Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R 		0.770 0.543
Esr1
M00813_2.00 		Mus musculus
NRKGTCANNN
NNNTGACMYN		 PBM
Weirauch et al.(2013)
pTH3510 		0.755 0.514
ESR1
M03356_2.00 		Homo sapiens
NRGGTCAMVRTGACCTK
MAGGTCAYBKTGACCYN		 SELEX
Jolma et al.(2013)
ESR1_1 		0.755 0.514
ESR1
M05569_2.00 		Homo sapiens
NAGGTCAYSRTGACCTN
NAGGTCAYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX 		0.755 0.514
ESR1
M05571_2.00 		Homo sapiens
NRGGTCANSNTGACCYN
NRGGTCANSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX 		0.755 0.514
ESR1
M07985_2.00 		Homo sapiens
DNBYMAAGGTCANN
NNTGACCTTKRVNH		 ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford 		0.755 0.514
ESR1
M08217_2.00 		Homo sapiens
NHNRGGTCANNNTGNCCY
RGGNCANNNTGACCYNDN		 ChIP-seq
Contrino et al.(2012)
Mv66 		0.755 0.514
ESR1
M08218_2.00 		Homo sapiens
CCAAGGTCAS
STGACCTTGG		 ChIP-seq
Contrino et al.(2012)
Mv67 		0.755 0.514
ESR1
M09267_2.00 		Homo sapiens
RGGKCABMNTGMCCY
RGGKCANKVTGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A 		0.755 0.514
Esr1
M09309_2.00 		Mus musculus
RGGDCABKSTGWCCY
RGGWCASMVTGHCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A 		0.755 0.514
ESR1
M09604_2.00 		Homo sapiens
NRGGTCANNNTGACC
GGTCANNNTGACCYN		 Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished 		0.755 0.514
ESR1
M11098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_01 		0.755 0.514
ESR1
M11099_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q4 		0.755 0.514
ESR1
M11100_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01 		0.755 0.514
ESR1
M11101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02 		0.755 0.514
ESR1
M11102_2.00 		Homo sapiens
NHRGGTCAVNNHNNHYBNN
NNVRDNNDNNBTGACCYDN		 Transfac
Matys et al.(2006)
V$ER_Q6 		0.755 0.514
ESR1
M11103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_04 		0.755 0.514
ESR1
M11104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_05 		0.755 0.514
ESR1
M05570_2.00 		Homo sapiens
NAGGTCAYSRYGACCTH
DAGGTCRYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX 		0.755 0.514
ESR1
M05572_2.00 		Homo sapiens
NRGGTCANSBYGACCYN
NRGGTCRVSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX 		0.755 0.514
Hnf4a
M00182_2.00 		Mus musculus
NNRGKYMRNN
NNYKRMCYNN		 PBM
Badis et al.(2009)
Hnf4a_2640 		0.755 0.614
HNF4A
M03357_2.00 		Homo sapiens
RWTGRACTTTGSACYB
VRGTSCAAAGTYCAWY		 SELEX
Jolma et al.(2013)
HNF4A_1 		0.755 0.614
HNF4A
M03358_2.00 		Homo sapiens
RRGGKCAAAGTCCRBN
NVYGGACTTTGMCCYY		 SELEX
Jolma et al.(2013)
HNF4A_2 		0.755 0.614
HNF4A
M03359_2.00 		Homo sapiens
NDTGGACTTTGDACYB
VRGTHCAAAGTCCAHN		 SELEX
Jolma et al.(2013)
HNF4A_3 		0.755 0.614
HNF4A
M03360_2.00 		Homo sapiens
RRGGTCAAAGKTCA
TGAMCTTTGACCYY		 SELEX
Jolma et al.(2013)
HNF4A_4 		0.755 0.614
HNF4A
M03361_2.00 		Homo sapiens
VRGGTCAAAGTCCANN
NNTGGACTTTGACCYB		 SELEX
Jolma et al.(2013)
HNF4A_5 		0.755 0.614
HNF4A
M03362_2.00 		Homo sapiens
RRGTYCAAAGKTCAH
DTGAMCTTTGRACYY		 SELEX
Jolma et al.(2013)
HNF4A_6 		0.755 0.614
Hnf4a
M03426_2.00 		Mus musculus
RRGGTCAAAGTCCANN
NNTGGACTTTGACCYY		 SELEX
Jolma et al.(2013)
Hnf4a_1 		0.755 0.614
HNF4A
M05573_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_1 		0.755 0.614
HNF4A
M05574_2.00 		Homo sapiens
RRGGTCAAAGTCCAH
DTGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_2 		0.755 0.614
HNF4A
M05575_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_3 		0.755 0.614
HNF4A
M05576_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_4 		0.755 0.614
HNF4A
M08219_2.00 		Homo sapiens
VRGDBCAAAGKYCAN
NTGRMCTTTGVHCYB		 ChIP-seq
Contrino et al.(2012)
Mv81 		0.755 0.614
HNF4A
M08220_2.00 		Homo sapiens
AGTCCA
TGGACT		 ChIP-seq
Contrino et al.(2012)
Mv82 		0.755 0.614
HNF4A
M09268_2.00 		Homo sapiens
VRGKNCAAAGTYCA
TGRACTTTGNMCYB		 Misc
Kulakovskiy et al.(2013)
HNF4A_HUMAN.H11MO.0.A 		0.755 0.614
Hnf4a
M09308_2.00 		Mus musculus
NRGKBCAAAGTYCA
TGRACTTTGVMCYN		 Misc
Kulakovskiy et al.(2013)
HNF4A_MOUSE.H11MO.0.A 		0.755 0.614
HNF4A
M09605_2.00 		Homo sapiens
NNVRGDNCAAAGKYCA
TGRMCTTTGNHCYBNN		 Misc
Heinz et al.(2010)
HepG2-HNF4a_GSE25021 		0.755 0.614
HNF4A
M11105_2.00 		Homo sapiens
VRGGNCAAAGKYCRB
VYGRMCTTTGNCCYB		 Transfac
Matys et al.(2006)
V$HNF4_01_B 		0.755 0.614
HNF4A
M11106_2.00 		Homo sapiens
NNNRGDBYAAAGKBCANND
HNNTGVMCTTTRVHCYNNN		 Transfac
Matys et al.(2006)
V$HNF4_01 		0.755 0.614
HNF4A
M11107_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_09 		0.755 0.614
HNF4A
M11108_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_10 		0.755 0.614
HNF4A
M11109_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4ALPHA_Q6 		0.755 0.614
HNF4A
M11110_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q3 		0.755 0.614
HNF4A
M11111_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q6_01 		0.755 0.614
HNF4A
M11112_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_01 		0.755 0.614
HNF4A
M11113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_02 		0.755 0.614
HNF4A
M11114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_03 		0.755 0.614
HNF4A
M11115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_04 		0.755 0.614
HNF4A
M05577_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_1 		0.755 0.614
HNF4A
M05578_2.00 		Homo sapiens
RRGGTCAAAGTCCRN
NYGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_2 		0.755 0.614
HNF4A
M05579_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_3 		0.755 0.614
HNF4A
M05580_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_4 		0.755 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTRE_0000285101 Nuclear receptor 63 132

Links

Other Nuclear receptor family TFs
Other Trichuris trichiura TFs

2778 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PBX3 Homo sapiens ENSG00000167081 D
PBX1 Homo sapiens ENSG00000185630 D
PBX2 Homo sapiens ENSG00000204304 D
Pbx2 Mus musculus ENSMUSG00000034673 D
Pbx3 Mus musculus ENSMUSG00000038718 D
Pbx1 Mus musculus ENSMUSG00000052534 D
pbx4 Tetraodon nigroviridis ENSTNIG00000018555 D
Bm3730 Brugia malayi Bm3730 I
CBG05292 Caenorhabditis briggsae CBG05292 I
CBG16494 Caenorhabditis briggsae CBG16494 I
CBN02733 Caenorhabditis brenneri CBN02733 I
CBN28672 Caenorhabditis brenneri CBN28672 I
CJA03466 Caenorhabditis japonica CJA03466 I
CJA14922 Caenorhabditis japonica CJA14922 I
CRE19232 Caenorhabditis remanei CRE19232 I
EFV58423 Trichinella spiralis EFV58423 I
PBX4 Anolis carolinensis ENSACAG00000004770 I
PBX1 Anolis carolinensis ENSACAG00000005840 I
PBX2 Anolis carolinensis ENSACAG00000012549 I
ENSAMEG00000002519 Ailuropoda melanoleuca ENSAMEG00000002519 I
ENSAMEG00000006543 Ailuropoda melanoleuca ENSAMEG00000006543 I
ENSAMEG00000011909 Ailuropoda melanoleuca ENSAMEG00000011909 I
ENSAMXG00000017025 Astyanax mexicanus ENSAMXG00000017025 I
ENSAMXG00000017567 Astyanax mexicanus ENSAMXG00000017567 I
ENSAPLG00000002733 Anas platyrhynchos ENSAPLG00000002733 I
ENSAPLG00000004073 Anas platyrhynchos ENSAPLG00000004073 I
ENSAPLG00000012834 Anas platyrhynchos ENSAPLG00000012834 I
PBX4 Bos taurus ENSBTAG00000009975 I
PBX3 Bos taurus ENSBTAG00000013314 I
PBX1 Bos taurus ENSBTAG00000013801 I
PBX2 Bos taurus ENSBTAG00000014421 I
PBX2 Canis familiaris ENSCAFG00000000783 I
PBX1 Canis familiaris ENSCAFG00000013289 I
PBX4 Canis familiaris ENSCAFG00000014191 I
PBX3 Canis familiaris ENSCAFG00000020175 I
PBX1 Choloepus hoffmanni ENSCHOG00000007502 I
pbx Ciona intestinalis ENSCING00000009075 I
PBX2 Callithrix jacchus ENSCJAG00000001886 I
PBX1 Callithrix jacchus ENSCJAG00000004712 I
PBX3 Callithrix jacchus ENSCJAG00000007020 I
NOTCH4 Cavia porcellus ENSCPOG00000000591 I
PBX3 Cavia porcellus ENSCPOG00000004530 I
PBX1 Cavia porcellus ENSCPOG00000005958 I
ENSCSAG00000005070 Chlorocebus sabaeus ENSCSAG00000005070 I
ENSCSAG00000009322 Chlorocebus sabaeus ENSCSAG00000009322 I
ENSCSAG00000010678 Chlorocebus sabaeus ENSCSAG00000010678 I
ENSCSAG00000013655 Chlorocebus sabaeus ENSCSAG00000013655 I
ENSCSAVG00000001721 Ciona savignyi ENSCSAVG00000001721 I
pbx3b Danio rerio ENSDARG00000013615 I
pbx2 Danio rerio ENSDARG00000019717 I
pbx4 Danio rerio ENSDARG00000052150 I
pbx3a Danio rerio ENSDARG00000089262 I
pbx1a Danio rerio ENSDARG00000100494 I
pbx1b Danio rerio ENSDARG00000101131 I
PBX1 Dasypus novemcinctus ENSDNOG00000035929 I
PBX2 Dasypus novemcinctus ENSDNOG00000042174 I
PBX3 Dasypus novemcinctus ENSDNOG00000043756 I
Pbx2 Dipodomys ordii ENSDORG00000009932 I
Pbx1 Dipodomys ordii ENSDORG00000012241 I
PBX2 Equus caballus ENSECAG00000003887 I
PBX1 Equus caballus ENSECAG00000013058 I
PBX1 Erinaceus europaeus ENSEEUG00000008155 I
PBX2 Erinaceus europaeus ENSEEUG00000014386 I
PBX4 Echinops telfairi ENSETEG00000002650 I
ENSFALG00000002211 Ficedula albicollis ENSFALG00000002211 I
ENSFALG00000007934 Ficedula albicollis ENSFALG00000007934 I
PBX2 Felis catus ENSFCAG00000004530 I
ENSFCAG00000005533 Felis catus ENSFCAG00000005533 I
PBX3 Felis catus ENSFCAG00000014463 I
PBX4 Felis catus ENSFCAG00000014536 I
PBX1 Gasterosteus aculeatus ENSGACG00000003964 I
pbx4 Gasterosteus aculeatus ENSGACG00000010133 I
pbx3b Gasterosteus aculeatus ENSGACG00000011999 I
pbx2 Gasterosteus aculeatus ENSGACG00000013077 I
PBX1 Gasterosteus aculeatus ENSGACG00000013411 I
PBX3 Gallus gallus ENSGALG00000000972 I
PBX1 Gallus gallus ENSGALG00000003429 I
ENSGALG00000013419 Gallus gallus ENSGALG00000013419 I
PBX2 Gorilla gorilla ENSGGOG00000002325 I
PBX4 Gorilla gorilla ENSGGOG00000006000 I
PBX3 Gorilla gorilla ENSGGOG00000009025 I
PBX1 Gorilla gorilla ENSGGOG00000011303 I
ENSGMOG00000007244 Gadus morhua ENSGMOG00000007244 I
ENSGMOG00000007627 Gadus morhua ENSGMOG00000007627 I
ENSGMOG00000009317 Gadus morhua ENSGMOG00000009317 I
ENSGMOG00000010178 Gadus morhua ENSGMOG00000010178 I
ENSGMOG00000012309 Gadus morhua ENSGMOG00000012309 I
ENSLACG00000000028 Latimeria chalumnae ENSLACG00000000028 I
ENSLACG00000012535 Latimeria chalumnae ENSLACG00000012535 I
ENSLACG00000017783 Latimeria chalumnae ENSLACG00000017783 I
PBX2 Loxodonta africana ENSLAFG00000010860 I
PBX1 Loxodonta africana ENSLAFG00000015741 I
PBX3 Loxodonta africana ENSLAFG00000016898 I
ENSLOCG00000001302 Lepisosteus oculatus ENSLOCG00000001302 I
ENSLOCG00000004419 Lepisosteus oculatus ENSLOCG00000004419 I
ENSMEUG00000015905 Macropus eugenii ENSMEUG00000015905 I
PBX1 Meleagris gallopavo ENSMGAG00000003669 I
PBX3 Meleagris gallopavo ENSMGAG00000008578 I
PBX4 Meleagris gallopavo ENSMGAG00000011441 I
PBX1 Microcebus murinus ENSMICG00000001280 I
PBX2 Microcebus murinus ENSMICG00000001829 I
ENSMICG00000002963 Microcebus murinus ENSMICG00000002963 I
PBX4 Microcebus murinus ENSMICG00000005939 I
ENSMLUG00000000548 Myotis lucifugus ENSMLUG00000000548 I
PBX3 Myotis lucifugus ENSMLUG00000008546 I
PBX3 Macaca mulatta ENSMMUG00000013763 I
PBX2 Macaca mulatta ENSMMUG00000018456 I
PBX1 Macaca mulatta ENSMMUG00000019108 I
PBX1 Monodelphis domestica ENSMODG00000001238 I
PBX4 Monodelphis domestica ENSMODG00000004459 I
PBX2 Monodelphis domestica ENSMODG00000014873 I
PBX3 Monodelphis domestica ENSMODG00000019785 I
ENSMPUG00000003773 Mustela putorius furo ENSMPUG00000003773 I
ENSMPUG00000010132 Mustela putorius furo ENSMPUG00000010132 I
ENSMPUG00000013876 Mustela putorius furo ENSMPUG00000013876 I
ENSMPUG00000015365 Mustela putorius furo ENSMPUG00000015365 I
Pbx4 Mus musculus ENSMUSG00000031860 I
ENSNLEG00000006307 Nomascus leucogenys ENSNLEG00000006307 I
ENSNLEG00000006632 Nomascus leucogenys ENSNLEG00000006632 I
ENSNLEG00000014662 Nomascus leucogenys ENSNLEG00000014662 I
ENSNLEG00000017398 Nomascus leucogenys ENSNLEG00000017398 I
PBX3 Ornithorhynchus anatinus ENSOANG00000010436 I
ENSOARG00000000135 Ovis aries ENSOARG00000000135 I
ENSOARG00000007632 Ovis aries ENSOARG00000007632 I
ENSOARG00000011306 Ovis aries ENSOARG00000011306 I
ENSOARG00000012658 Ovis aries ENSOARG00000012658 I
PBX3 Oryctolagus cuniculus ENSOCUG00000012302 I
PBX2 Oryctolagus cuniculus ENSOCUG00000016439 I
PBX1 Otolemur garnettii ENSOGAG00000000132 I
PBX4 Otolemur garnettii ENSOGAG00000007450 I
PBX2 Otolemur garnettii ENSOGAG00000016303 I
PBX3 Otolemur garnettii ENSOGAG00000031460 I
ENSONIG00000001875 Oreochromis niloticus ENSONIG00000001875 I
ENSONIG00000008651 Oreochromis niloticus ENSONIG00000008651 I
ENSONIG00000009796 Oreochromis niloticus ENSONIG00000009796 I
ENSONIG00000010896 Oreochromis niloticus ENSONIG00000010896 I
ENSONIG00000019228 Oreochromis niloticus ENSONIG00000019228 I
PBX2 Ochotona princeps ENSOPRG00000004407 I
PBX1 Ochotona princeps ENSOPRG00000006942 I
pbx4 Oryzias latipes ENSORLG00000006519 I
PBX1 Oryzias latipes ENSORLG00000014225 I
pbx2 Oryzias latipes ENSORLG00000016171 I
ENSPANG00000004463 Papio anubis ENSPANG00000004463 I
ENSPANG00000010493 Papio anubis ENSPANG00000010493 I
ENSPANG00000012912 Papio anubis ENSPANG00000012912 I
ENSPANG00000024812 Papio anubis ENSPANG00000024812 I
PBX1 Procavia capensis ENSPCAG00000002628 I
PBX2 Procavia capensis ENSPCAG00000012658 I
ENSPFOG00000001961 Poecilia formosa ENSPFOG00000001961 I
ENSPFOG00000007033 Poecilia formosa ENSPFOG00000007033 I
ENSPFOG00000007638 Poecilia formosa ENSPFOG00000007638 I
ENSPFOG00000016269 Poecilia formosa ENSPFOG00000016269 I
ENSPFOG00000017341 Poecilia formosa ENSPFOG00000017341 I
ENSPPYG00000000572 Pongo abelii ENSPPYG00000000572 I
ENSPPYG00000016486 Pongo abelii ENSPPYG00000016486 I
ENSPPYG00000019612 Pongo abelii ENSPPYG00000019612 I
ENSPSIG00000011597 Pelodiscus sinensis ENSPSIG00000011597 I
ENSPSIG00000015108 Pelodiscus sinensis ENSPSIG00000015108 I
ENSPSIG00000018139 Pelodiscus sinensis ENSPSIG00000018139 I
PBX1 Pan troglodytes ENSPTRG00000001611 I
PBX2 Pan troglodytes ENSPTRG00000018012 I
PBX3 Pan troglodytes ENSPTRG00000021374 I
PBX2 Pteropus vampyrus ENSPVAG00000005153 I
PBX4 Pteropus vampyrus ENSPVAG00000017459 I
Pbx2 Rattus norvegicus ENSRNOG00000000440 I
Pbx1 Rattus norvegicus ENSRNOG00000004693 I
Pbx4 Rattus norvegicus ENSRNOG00000010736 I
Pbx3 Rattus norvegicus ENSRNOG00000022162 I
ENSSHAG00000009379 Sarcophilus harrisii ENSSHAG00000009379 I
ENSSHAG00000010477 Sarcophilus harrisii ENSSHAG00000010477 I
ENSSHAG00000011385 Sarcophilus harrisii ENSSHAG00000011385 I
ENSSHAG00000012750 Sarcophilus harrisii ENSSHAG00000012750 I
PBX2 Sus scrofa ENSSSCG00000001438 I
PBX3 Sus scrofa ENSSSCG00000005604 I
PBX1 Sus scrofa ENSSSCG00000006331 I
PBX4 Sus scrofa ENSSSCG00000013933 I
ENSSTOG00000007166 Ictidomys tridecemlineatus ENSSTOG00000007166 I
ENSSTOG00000011504 Ictidomys tridecemlineatus ENSSTOG00000011504 I
ENSSTOG00000014748 Ictidomys tridecemlineatus ENSSTOG00000014748 I
PBX3 Taeniopygia guttata ENSTGUG00000007364 I
PBX1 Taeniopygia guttata ENSTGUG00000017317 I
pbx2 Tetraodon nigroviridis ENSTNIG00000003902 I
pbx3b Tetraodon nigroviridis ENSTNIG00000004339 I
pbx1b Tetraodon nigroviridis ENSTNIG00000006548 I
pbx1b Takifugu rubripes ENSTRUG00000007203 I
pbx3b Takifugu rubripes ENSTRUG00000008751 I
pbx2 Takifugu rubripes ENSTRUG00000011925 I
pbx4 Takifugu rubripes ENSTRUG00000014688 I
ENSTSYG00000012332 Tarsius syrichta ENSTSYG00000012332 I
PBX1 Tursiops truncatus ENSTTRG00000006085 I
PBX2 Tursiops truncatus ENSTTRG00000013787 I
PBX3 Vicugna pacos ENSVPAG00000009274 I
ENSXMAG00000003051 Xiphophorus maculatus ENSXMAG00000003051 I
ENSXMAG00000013399 Xiphophorus maculatus ENSXMAG00000013399 I
ENSXMAG00000013564 Xiphophorus maculatus ENSXMAG00000013564 I
ENSXMAG00000014994 Xiphophorus maculatus ENSXMAG00000014994 I
ENSXMAG00000016285 Xiphophorus maculatus ENSXMAG00000016285 I
HelroG185992 Helobdella robusta HelroG185992 I
HelroG73759 Helobdella robusta HelroG73759 I
HelroG87471 Helobdella robusta HelroG87471 I
ISCW023208 Ixodes scapularis ISCW023208 I
LOAG_05520 Loa loa LOAG_05520 I
LotgiG92730 Lottia gigantea LotgiG92730 I
ML04768a Mnemiopsis leidyi ML04768a I
NEMVEDRAFT_v1g229018 Nematostella vectensis NEMVEDRAFT_v1g229018 I
Ppa-ceh-20 Pristionchus pacificus PPA15416 I
Ppa-ceh-40 Pristionchus pacificus PPA15417 I
SMAR009718 Strigamia maritima SMAR009718 I
Smp_126030 Schistosoma mansoni Smp_126030 I
SPU_023739 Strongylocentrotus purpuratus SPU_023739 I
tetur07g02140 Tetranychus urticae tetur07g02140 I
TriadG21171 Trichoplax adhaerens TriadG21171 I
ceh-20 Caenorhabditis elegans WBGene00000443 I
ceh-40 Caenorhabditis elegans WBGene00000461 I
WBGene00245730 Onchocerca volvulus WBGene00245730 I
Aan_R002029 Calypte anna Aan_R002029 I
Aan_R009382 Calypte anna Aan_R009382 I
Aan_R012003 Calypte anna Aan_R012003 I
Afo_R003401 Aptenodytes forsteri Afo_R003401 I
Afo_R010027 Aptenodytes forsteri Afo_R010027 I
Afo_R015814 Aptenodytes forsteri Afo_R015814 I
Alligator_sinensis_CCG010576.1 Alligator sinensis Alligator_sinensis_CCG010576.1 I
Alligator_sinensis_CCG016220.1 Alligator sinensis Alligator_sinensis_CCG016220.1 I
Alligator_sinensis_CCG017958.1 Alligator sinensis Alligator_sinensis_CCG017958.1 I
Cmyd_10003202 Chelonia mydas Cmyd_10003202 I
Cmyd_10017112 Chelonia mydas Cmyd_10017112 I
Cmyd_10020748 Chelonia mydas Cmyd_10020748 I
ENSBTAP00000018349-D1 Bos grunniens ENSBTAP00000018349-D1 I
ENSMMUP00000018094 Macaca fascicularis ENSMMUP00000018094 I
ENSP00000251203-D1 Bos grunniens ENSP00000251203-D1 I
ENSP00000251203 Macaca fascicularis ENSP00000251203 I
ENSP00000405890-D2 Bos grunniens ENSP00000405890-D2 I
ENSP00000405890 Macaca fascicularis ENSP00000405890 I
Gfo_R007898 Geospiza fortis Gfo_R007898 I
Gfo_R012405 Geospiza fortis Gfo_R012405 I
Myotis_brandtii_Pbx1_10024321 Myotis brandtii Myotis_brandtii_Pbx1_10024321 I
Myotis_brandtii_PBX2_10007211 Myotis brandtii Myotis_brandtii_PBX2_10007211 I
Myotis_brandtii_PBX3_10025081 Myotis brandtii Myotis_brandtii_PBX3_10025081 I
Ogr01865 Ophisaurus gracilis Ogr01865 I
Ogr09525 Ophisaurus gracilis Ogr09525 I
Ogr10509 Ophisaurus gracilis Ogr10509 I
Pvit_05869 Pogona vitticeps Pvit_05869 I
Pvit_08914 Pogona vitticeps Pvit_08914 I
Pvit_11034 Pogona vitticeps Pvit_11034 I
Pvit_18652 Pogona vitticeps Pvit_18652 I
Tal_R003350 Tyto alba Tal_R003350 I
Tal_R007899 Tyto alba Tal_R007899 I
estExt_fgenesh2_pg.C_1480041 Branchiostoma floridae estExt_fgenesh2_pg.C_1480041 I
estExt_gwp.C_30002 Branchiostoma floridae estExt_gwp.C_30002 I
Ocbimv22018840m.g Octopus bimaculoides Ocbimv22018840m.g I
Sakowv30029721m.g Saccoglossus kowalevskii Sakowv30029721m.g I
Sjc_0102450 Schistosoma japonicum Sjc_0102450 I
SMU15032137 Schmidtea mediterranea SMU15032137 I
SNAPOd2T00029313001 Oikopleura dioica SNAPOd2T00029313001 I
pbx1 Xenopus tropicalis XB-GENE-1217592 I
pbx1.S Xenopus laevis XB-GENE-1217596 I
pbx2 Xenopus tropicalis XB-GENE-484669 I
pbx2.L Xenopus laevis XB-GENE-865111 I
XP_002937921 Xenopus tropicalis XP_002937921 I
Minc11665 Meloidogyne incognita Minc11665 I
Minc15321 Meloidogyne incognita Minc15321 I
XP_002159231.1 Hydra magnipapillata XP_002159231.1 I
XP_002162385.1 Hydra magnipapillata XP_002162385.1 I
ACAC_0000417401 Angiostrongylus cantonensis ACAC_0000417401 I
ACOC_0000838301 Angiostrongylus costaricensis ACOC_0000838301 I
ALUE_0000182501 Ascaris lumbricoides ALUE_0000182501 I
ALUE_0000469301 Ascaris lumbricoides ALUE_0000469301 I
ANCCAN_02324 Ancylostoma caninum ANCCAN_02324 I
ANCCEY_03571 Ancylostoma ceylanicum ANCCEY_03571 I
ANCDUO_22899 Ancylostoma duodenale ANCDUO_22899 I
ASIM_0001335101 Anisakis simplex ASIM_0001335101 I
ASU_04815 Ascaris suum ASU_04815 I
ASU_06937 Ascaris suum ASU_06937 I
BTMF_0001405101 Brugia timori BTMF_0001405101 I
BXY_0668200 Bursaphelenchus xylophilus BXY_0668200 I
BXY_1323400 Bursaphelenchus xylophilus BXY_1323400 I
csin102499 Clonorchis sinensis csin102499 I
D917_00421 Trichinella nativa D917_00421 I
D918_01226 Trichuris suis D918_01226 I
DICVIV_04922 Dictyocaulus viviparus DICVIV_04922 I
ECANG7_04723 Echinococcus canadensis ECANG7_04723 I
EEL_0000817901 Elaeophora elaphi EEL_0000817901 I
EmuJ_000238100 Echinococcus multilocularis EmuJ_000238100 I
EVEC_0000296301 Enterobius vermicularis EVEC_0000296301 I
EVEC_0001238401 Enterobius vermicularis EVEC_0001238401 I
genemark-nMf.1.1.scaf11388-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf11388-processed-gene-0.1 I
GPLIN_000810200 Globodera pallida GPLIN_000810200 I
GPLIN_001433700 Globodera pallida GPLIN_001433700 I
GPUH_0000388101 Gongylonema pulchrum GPUH_0000388101 I
GPUH_0001554401 Gongylonema pulchrum GPUH_0001554401 I
Hba_18275 Heterorhabditis bacteriophora Hba_18275 I
Hba_18283 Heterorhabditis bacteriophora Hba_18283 I
Hba_19908 Heterorhabditis bacteriophora Hba_19908 I
HCOI00727700 Haemonchus contortus HCOI00727700 I
HCOI00728200 Haemonchus contortus HCOI00728200 I
HCOI00728800 Haemonchus contortus HCOI00728800 I
HCOI01313500 Haemonchus contortus HCOI01313500 I
HmN_000675900 Hymenolepis microstoma HmN_000675900 I
HPLM_0000438801 Haemonchus placei HPLM_0000438801 I
L596_g12541 Steinernema carpocapsae L596_g12541 I
L596_g8590 Steinernema carpocapsae L596_g8590 I
L596_g8591 Steinernema carpocapsae L596_g8591 I
L889_g30093 Steinernema feltiae L889_g30093 I
L889_g31827 Steinernema feltiae L889_g31827 I
L889_g31828 Steinernema feltiae L889_g31828 I
L892_g20537 Steinernema scapterisci L892_g20537 I
L892_g20538 Steinernema scapterisci L892_g20538 I
L892_g4011 Steinernema scapterisci L892_g4011 I
L893_g11289 Steinernema glaseri L893_g11289 I
L893_g3332 Steinernema glaseri L893_g3332 I
L898_g9521 Steinernema monticolum L898_g9521 I
L898_g9522 Steinernema monticolum L898_g9522 I
MCOS_0001019701 Mesocestoides corti MCOS_0001019701 I
MhA1_Contig121.frz3.gene3 Meloidogyne hapla MhA1_Contig121.frz3.gene3 I
nAv.1.0.1.g03768 Acanthocheilonema viteae nAv.1.0.1.g03768 I
nAv.1.0.1.g10099 Acanthocheilonema viteae nAv.1.0.1.g10099 I
nDi.2.2.2.g04122 Dirofilaria immitis nDi.2.2.2.g04122 I
NECAME_04423 Necator americanus NECAME_04423 I
nLs.2.1.2.g08386 Litomosoides sigmodontis nLs.2.1.2.g08386 I
nOo.2.0.1.g07671 Onchocerca ochengi nOo.2.0.1.g07671 I
nOo.2.0.1.g10296 Onchocerca ochengi nOo.2.0.1.g10296 I
nRc.2.0.1.g18893 Romanomermis culicivorax nRc.2.0.1.g18893 I
OESDEN_13476 Oesophagostomum dentatum OESDEN_13476 I
OFLC_0000202001 Onchocerca flexuosa OFLC_0000202001 I
PTRK_0000628300 Parastrongyloides trichosuri PTRK_0000628300 I
PXEA_0000626001 Protopolystoma xenopodis PXEA_0000626001 I
RSKR_0000629700 Rhabditophanes kr3021 RSKR_0000629700 I
SBAD_0001248701 Soboliphyme baturini SBAD_0001248701 I
scaffold405-EXSNAP2012.16 Pristionchus exspectatus scaffold405-EXSNAP2012.16 I
scaffold405-EXSNAP2012.17 Pristionchus exspectatus scaffold405-EXSNAP2012.17 I
SCUD_0001284901 Schistosoma curassoni SCUD_0001284901 I
SMRZ_0000528001 Schistosoma margrebowiei SMRZ_0000528001 I
SMTD_0000782801 Schistosoma mattheei SMTD_0000782801 I
SMUV_0000019501 Syphacia muris SMUV_0000019501 I
SMUV_0000469701 Syphacia muris SMUV_0000469701 I
SPAL_0000911600 Strongyloides papillosus SPAL_0000911600 I
SROB_0001130901 Schistosoma rodhaini SROB_0001130901 I
SSTP_0000149900 Strongyloides stercoralis SSTP_0000149900 I
SVE_0186300 Strongyloides venezuelensis SVE_0186300 I
T265_00694 Opisthorchis viverrini T265_00694 I
TASK_0000429801 Taenia asiatica TASK_0000429801 I
TCLT_0000513801 Thelazia callipaeda TCLT_0000513801 I
TCNE_0000182601 Toxocara canis TCNE_0000182601 I
TELCIR_09298 Teladorsagia circumcincta TELCIR_09298 I
TMUE_s0185001000 Trichuris muris TMUE_s0185001000 I
TTRE_0000478301 Trichuris trichiura TTRE_0000478301 I