CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TP53
(
Equus caballus
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSECAG00000008126
T311025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.927
0.927
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.927
0.927
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.927
0.927
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.927
0.927
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.927
0.927
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.927
0.927
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.927
0.927
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.927
0.927
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.927
0.927
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.879
0.879
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.879
0.879
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.879
0.879
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.879
0.879
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000006210
p53
1
165
YSPTLNKLFCQLAKTCPVQLLVSSPPPPGTRVRAMAIYKKSEFMTEVVRRCPHHERCSDSSDGLAPPQHLIRVEGNLRAEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNFMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENF
Links
Other
p53
family TFs
Other
Equus caballus
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M437DRAFT_55860
Aureobasidium melanogenum
M437DRAFT_55860
I
0.000
AB03935.1
Alternaria brassicicola
AB03935.1
N
0.000
SNOG_08725
Stagonospora nodorum
SNOG_08725
N
0.000
fgenesh1_pg.C_scaffold_13000086
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_13000086
N
0.000
fgenesh1_pg.C_chr_12000059
Mycosphaerella graminicola
fgenesh1_pg.C_chr_12000059
N
0.000
estExt_Genewise1Plus.C_20945
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_20945
N
0.000
SNOG_08725
Phaeosphaeria nodorum
SNOG_08725
N
0.000
SETTUDRAFT_161746
Setosphaeria turcica
SETTUDRAFT_161746
N
0.000
SETTUDRAFT_135369
Setosphaeria turcica
SETTUDRAFT_135369
N
0.000
SEPMUDRAFT_152192
Sphaerulina musiva
SEPMUDRAFT_152192
N
0.000
PTT_14925
Pyrenophora teres
PTT_14925
N
0.000
PTT_01276
Pyrenophora teres
PTT_01276
N
0.000
PTRG_08828
Pyrenophora triticirepentis
PTRG_08828
N
0.000
PTRG_04376
Pyrenophora triticirepentis
PTRG_04376
N
0.000
Mycgr3G96927
Zymoseptoria tritici
Mycgr3G96927
N
0.000
M438DRAFT_332335
Aureobasidium pullulans
M438DRAFT_332335
N
0.000
LEMA_P046620.1
Leptosphaeria maculans
LEMA_P046620.1
N
0.000
DOTSEDRAFT_75913
Dothistroma septosporum
DOTSEDRAFT_75913
N
0.000
COCVIDRAFT_26374
Bipolaris victoriae
COCVIDRAFT_26374
N
0.000
COCVIDRAFT_12967
Bipolaris victoriae
COCVIDRAFT_12967
N
0.000
COCSADRAFT_40583
Bipolaris sorokiniana
COCSADRAFT_40583
N
0.000
COCSADRAFT_155567
Bipolaris sorokiniana
COCSADRAFT_155567
N
0.000
COCMIDRAFT_82835
Bipolaris oryzae
COCMIDRAFT_82835
N
0.000
COCMIDRAFT_21935
Bipolaris oryzae
COCMIDRAFT_21935
N
0.000
COCCADRAFT_99387
Bipolaris zeicola
COCCADRAFT_99387
N
0.000
COCCADRAFT_3377
Bipolaris zeicola
COCCADRAFT_3377
N
0.000
COCC4DRAFT_200873
Bipolaris maydis
COCC4DRAFT_200873
N
0.000
COCC4DRAFT_124149
Bipolaris maydis
COCC4DRAFT_124149
N
0.000
BAUCODRAFT_138682
Baudoinia compniacensis
BAUCODRAFT_138682
N
0.000
AUEXF2481DRAFT_61161
Aureobasidium subglaciale
AUEXF2481DRAFT_61161
N
0.000