CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSETEG00000008987
(
Echinops telfairi
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSETEG00000008987
T311031_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.828
0.828
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.828
0.828
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.828
0.828
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.828
0.828
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.828
0.828
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.828
0.828
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.828
0.828
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.828
0.828
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.828
0.828
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.790
0.790
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.790
0.790
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.790
0.790
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.790
0.790
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000007296
p53
36
227
SSVPSQKTCPGTYGFTLGFLNSGTAKSVTCTYSPDLNKLFCQLAKTCPVQLGVTSLPPPGTRVRTMAIYKKSEHMTEVVKRCPHQERCSDYIDALAPPQHLTRVEGNQCAEYLEDNVTLQHSVVVPYEPLEVGADCTTIHYNFMCNSSCMGGMNRRPILTIISLEDTSGNLLGRNSFEVRVCACPGXXXXXX
Links
Other
p53
family TFs
Other
Echinops telfairi
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_06567
Dictyocaulus viviparus
DICVIV_06567
I
0.000
ACOC_0000564301
Angiostrongylus costaricensis
ACOC_0000564301
N
0.000
ANCCAN_03591
Ancylostoma caninum
ANCCAN_03591
N
0.000
ANCCEY_10263
Ancylostoma ceylanicum
ANCCEY_10263
N
0.000
NECAME_03378
Necator americanus
NECAME_03378
N
0.000