CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
tp73
(
Oryzias latipes
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSORLG00000004402
T311114_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.893
0.893
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.893
0.893
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.893
0.893
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.893
0.893
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.893
0.893
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.888
0.888
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.888
0.888
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000005521
p53
103
299
PAIPSNTDYPGPHDFQVSFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKLVSSPPHGSIIRAMPVYKKAEHVTEVVKRCPNHELGRDFNDGQTAPANHLIRVEGNNLCQYVDDPVTGRQSAYVPYETPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSFEGRICACPGRDRKADEDHF
Links
Other
p53
family TFs
Other
Oryzias latipes
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF282
Homo sapiens
ENSG00000170265
D
0.000
ZNF282
Oryctolagus cuniculus
ENSOCUG00000008423
I
0.000
Myotis_brandtii_ZNF282_10025638
Myotis brandtii
Myotis_brandtii_ZNF282_10025638
I
0.000
ZNF282
Tursiops truncatus
ENSTTRG00000015685
I
0.000
ZNF282
Tupaia belangeri
ENSTBEG00000000091
I
0.000
ENSSTOG00000021295
Ictidomys tridecemlineatus
ENSSTOG00000021295
I
0.000
ZNF282
Sus scrofa
ENSSSCG00000016773
I
0.000
Zfp282
Rattus norvegicus
ENSRNOG00000026981
I
0.000
ZNF282
Pan troglodytes
ENSPTRG00000019841
I
0.000
ENSPPYG00000018151
Pongo abelii
ENSPPYG00000018151
I
0.000
ENSPANG00000008719
Papio anubis
ENSPANG00000008719
I
0.000
ZNF282
Ochotona princeps
ENSOPRG00000010540
I
0.000
ZNF282
Otolemur garnettii
ENSOGAG00000030129
I
0.000
ZNF282
Bos taurus
ENSBTAG00000020448
I
0.000
Zfp282
Mus musculus
ENSMUSG00000025821
I
0.000
ENSMPUG00000006666
Mustela putorius furo
ENSMPUG00000006666
I
0.000
ZNF282
Monodelphis domestica
ENSMODG00000001987
I
0.000
ZNF282
Macaca mulatta
ENSMMUG00000000767
I
0.000
ZNF282
Myotis lucifugus
ENSMLUG00000010622
I
0.000
ENSMICG00000016620
Microcebus murinus
ENSMICG00000016620
I
0.000
ZNF398
Gorilla gorilla
ENSGGOG00000005812
I
0.000
ZNF282
Dasypus novemcinctus
ENSDNOG00000008361
I
0.000
ENSCSAG00000007010
Chlorocebus sabaeus
ENSCSAG00000007010
I
0.000