CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TP73
(
Procavia capensis
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSPCAG00000000703
T311120_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.969
0.969
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.969
0.969
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.969
0.969
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.969
0.969
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.969
0.969
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.959
0.959
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.959
0.959
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.856
0.856
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000000662
p53
109
304
PVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKLYCQIAKTCPIQMKVSTPPPPGTAVRAMPVYKKAEHVTEVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVMVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSFEGRICACPGRDRKADEDHF
Links
Other
p53
family TFs
Other
Procavia capensis
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_492220
Trichomonas vaginalis
TVAG_492220
N
0.000
TVAG_605680
Trichomonas vaginalis
TVAG_605680
N
0.000
TVAG_604280
Trichomonas vaginalis
TVAG_604280
N
0.000
TVAG_601940
Trichomonas vaginalis
TVAG_601940
N
0.000
TVAG_595670
Trichomonas vaginalis
TVAG_595670
N
0.000
TVAG_583560
Trichomonas vaginalis
TVAG_583560
N
0.000
TVAG_576750
Trichomonas vaginalis
TVAG_576750
N
0.000
TVAG_572150
Trichomonas vaginalis
TVAG_572150
N
0.000
TVAG_562960
Trichomonas vaginalis
TVAG_562960
N
0.000
TVAG_528530
Trichomonas vaginalis
TVAG_528530
N
0.000
TVAG_522310
Trichomonas vaginalis
TVAG_522310
N
0.000
TVAG_503770
Trichomonas vaginalis
TVAG_503770
N
0.000
TVAG_002150
Trichomonas vaginalis
TVAG_002150
N
0.000
TVAG_385510
Trichomonas vaginalis
TVAG_385510
N
0.000
TVAG_346500
Trichomonas vaginalis
TVAG_346500
N
0.000
TVAG_301230
Trichomonas vaginalis
TVAG_301230
N
0.000
TVAG_253420
Trichomonas vaginalis
TVAG_253420
N
0.000
TVAG_240230
Trichomonas vaginalis
TVAG_240230
N
0.000
TVAG_236370
Trichomonas vaginalis
TVAG_236370
N
0.000
TVAG_183950
Trichomonas vaginalis
TVAG_183950
N
0.000
TVAG_153670
Trichomonas vaginalis
TVAG_153670
N
0.000
TVAG_098980
Trichomonas vaginalis
TVAG_098980
N
0.000
TVAG_024040
Trichomonas vaginalis
TVAG_024040
N
0.000