Tp53 (Rattus norvegicus)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSRNOG00000010756 T311141_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Trp53
M03439_2.00 		Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT		 SELEX
Jolma et al.(2013)
Tp53_1 		0.938 0.938
Trp53
M03440_2.00 		Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT		 SELEX
Jolma et al.(2013)
Tp53_2 		0.938 0.938
Trp53
M03441_2.00 		Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY		 SELEX
Jolma et al.(2013)
Tp53_3 		0.871 0.871
Trp53
M09340_2.00 		Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY		 Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A 		0.871 0.871
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.908 0.908
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.908 0.908
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.908 0.908
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.908 0.908
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.908 0.908
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.908 0.908
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.908 0.908
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.908 0.908
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.908 0.908
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000047840 p53 93 287
ENSRNOP00000068796 p53 93 271
ENSRNOP00000074031 p53 93 287

Links

Other p53 family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIATDRAFT_9815 Trichoderma atroviride TRIATDRAFT_9815 N
MAM_06097 Metarhizium album MAM_06097 N
MANI_025150 Metarhizium anisopliae MANI_025150 N
MBR_00240 Metarhizium brunneum MBR_00240 N
MGU_08133 Metarhizium guizhouense MGU_08133 N
NechaG75378 Fusarium solani NechaG75378 N
OCS_04926 Ophiocordyceps sinensis OCS_04926 N
PFICI_06254 Pestalotiopsis fici PFICI_06254 N
SAPIO_CDS5481 Scedosporium apiospermum SAPIO_CDS5481 N
SPBR_07989 Sporothrix brasiliensis SPBR_07989 N
MAJ_06003 Metarhizium majus MAJ_06003 N
TRIREDRAFT_43269 Trichoderma reesei TRIREDRAFT_43269 N
TRIVIDRAFT_19860 Trichoderma virens TRIVIDRAFT_19860 N
UCRPA7_6169 Togninia minima UCRPA7_6169 N
VDBG_07369 Verticillium alfalfae VDBG_07369 N
VHEMI05051 Torrubiella hemipterigena VHEMI05051 N
X797_002594 Metarhizium robertsii X797_002594 N
fgenesh1_pg.sca_1_chr1_3_0000989 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000989 N
e_gw1.4.942.1 Cryphonectria parasitica e_gw1.4.942.1 N
FFUJ_00487 Fusarium fujikuroi FFUJ_00487 N
BBA_01626 Beauveria bassiana BBA_01626 N
CCM_00106 Cordyceps militaris CCM_00106 N
CFIO01_08383 Colletotrichum fioriniae CFIO01_08383 N
CGGC5_8876 Colletotrichum gloeosporioides CGGC5_8876 N
CH063_10454 Colletotrichum higginsianum CH063_10454 N
Cob_13289 Colletotrichum orbiculare Cob_13289 N
CPUR_01633 Claviceps purpurea CPUR_01633 N
CSUB01_06780 Colletotrichum sublineola CSUB01_06780 N
F503_04232 Ophiostoma piceae uamh F503_04232 N
ACRE_014390 Acremonium chrysogenum ACRE_014390 N
FGRRES_00750 Fusarium graminearum FGRRES_00750 N
FOXG_01081 Fusarium oxysporum FOXG_01081 N
FPSE_01269 Fusarium pseudograminearum FPSE_01269 N
FVEG_00433 Fusarium verticillioides FVEG_00433 N
GGTG_07801 Gaeumannomyces graminis GGTG_07801 N
GLRG_00605 Colletotrichum graminicola GLRG_00605 N
HMPREF1624_07505 Sporothrix schenckii HMPREF1624_07505 N
MAC_05157 Metarhizium acridum MAC_05157 N