CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000022774
(
Ictidomys tridecemlineatus
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSSTOG00000022774
T311154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.949
0.949
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.949
0.949
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.949
0.949
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.949
0.949
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.949
0.949
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.949
0.949
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.949
0.949
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.949
0.949
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.949
0.949
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.887
0.887
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.887
0.887
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.887
0.887
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.887
0.887
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000019678
p53
93
287
SSVPSQNTYPGVYGFRLGFIHSGTAKSVTCTYSPSLNKLFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKKSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRAEYLDDRNTFRHSVVVPYEPPEVGSECTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENF
Links
Other
p53
family TFs
Other
Ictidomys tridecemlineatus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI009636
Anopheles epiroticus
AEPI009636
N
YQE_03596
Dendroctonus ponderosae
YQE_03596
N
Cflo_10942--XP_001121936.1_APIME
Camponotus floridanus
Cflo_10942--XP_001121936.1_APIME
N
CLEC005025
Cimex lectularius
CLEC005025
N
CLEC005028
Cimex lectularius
CLEC005028
N
HHAL000145-PA
Halyomorpha halys
HHAL000145-PA
N
LCUP001485
Lucilia cuprina
LCUP001485
N
LDEC003260
Leptinotarsa decemlineata
LDEC003260
N
AATE011073
Anopheles atroparvus
AATE011073
N
AATE011230
Anopheles atroparvus
AATE011230
N
ACHR000032
Anopheles christyi
ACHR000032
N
ACHR010096
Anopheles christyi
ACHR010096
N
ACOM033895
Anopheles coluzzii
ACOM033895
N
ACUA000836
Anopheles culicifacies
ACUA000836
N
ACUA024277
Anopheles culicifacies
ACUA024277
N
TC013857
Tribolium castaneum
TC013857
N
AFAF002449
Anopheles farauti
AFAF002449
N
AFAF002772
Anopheles farauti
AFAF002772
N
AFUN010373
Anopheles funestus
AFUN010373
N
AMAM000172
Anopheles maculatus
AMAM000172
N
AMEC000479
Anopheles melas
AMEC000479
N
AMEC003904
Anopheles melas
AMEC003904
N
AMEM008406
Anopheles merus
AMEM008406
N
AMIN002198
Anopheles minimus
AMIN002198
N
AQUA006477
Anopheles quadriannulatus
AQUA006477
N
ASIS012990
Anopheles sinensis
ASIS012990
N
LLOJ002004
Lutzomyia longipalpis
LLOJ002004
N
MDOA009050
Musca domestica
MDOA009050
N
PPAI008603
Phlebotomus papatasi
PPAI008603
N
GL13850
Drosophila persimilis
FBgn0151455
N
AAEL001347
Aedes aegypti
AAEL001347
N
ACEP15165
Atta cephalotes
ACEP15165
N
ADAC008697
Anopheles darlingi
ADAC008697
N
ADAC009393
Anopheles darlingi
ADAC009393
N
BGIBMGA007797
Bombyx mori
BGIBMGA007797
N
CPIJ015425
Culex quinquefasciatus
CPIJ015425
N
DAPPUDRAFT_9525
Daphnia pulex
DAPPUDRAFT_9525
N
CG4374
Drosophila melanogaster
FBgn0039078
N
GA18142
Drosophila pseudoobscura
FBgn0078150
N
GF18765
Drosophila ananassae
FBgn0095782
N
GG12435
Drosophila erecta
FBgn0104723
N
GH20801
Drosophila grimshawi
FBgn0128264
N
GI10710
Drosophila mojavensis
FBgn0133474
N
CpipJ_CPIJ015425
Culex pipiens
CpipJ_CPIJ015425
N
GM23566
Drosophila sechellia
FBgn0178432
N
GD18382
Drosophila simulans
FBgn0189909
N
GJ23125
Drosophila virilis
FBgn0210227
N
GK13158
Drosophila willistoni
FBgn0215167
N
GE23956
Drosophila yakuba
FBgn0241098
N
GB52523
Apis mellifera
GB52523
N
HMEL006238
Heliconius melpomene
HMEL006238
N
KGM_19023
Danaus plexippus
KGM_19023
N
L798_13006
Zootermopsis nevadensis
L798_13006
N
MCINX016666
Melitaea cinxia
MCINX016666
N
NV22259
Nasonia vitripennis
NV22259
N
PHUM535390
Pediculus humanus
PHUM535390
N
SINV21477
Solenopsis invicta
SINV21477
N