CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14076
(
Caenorhabditis briggsae
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
CBG14076
T311462_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14076
Paired box
79
200
RSSGRNQLGRTYSPGLPLSMCEREEIVKLFQAGWKICDISKRLCVTHSCVSKILNRYRQTGSVKPKDAKEGRTESPLVLAVRDYRSRLGMCRQSEIREQLIRDGICSRDNAPSRSSINHILR
Links
Other
Paired box
family TFs
Other
Caenorhabditis briggsae
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0001095200
Parastrongyloides trichosuri
PTRK_0001095200
N
0.754
L893_g14515
Steinernema glaseri
L893_g14515
N
0.754
L898_g33187
Steinernema monticolum
L898_g33187
N
0.762
maker-nMf.1.1.scaf01187-augustus-gene-0.14
Meloidogyne floridensis
maker-nMf.1.1.scaf01187-augustus-gene-0.14
N
0.820
nAv.1.0.1.g08576
Acanthocheilonema viteae
nAv.1.0.1.g08576
N
0.849
NBR_0000487701
Nippostrongylus brasiliensis
NBR_0000487701
N
0.914
nDi.2.2.2.g00913
Dirofilaria immitis
nDi.2.2.2.g00913
N
0.861
NECAME_03708
Necator americanus
NECAME_03708
N
0.840
nLs.2.1.2.g06387
Litomosoides sigmodontis
nLs.2.1.2.g06387
N
0.832
nOo.2.0.1.g07401
Onchocerca ochengi
nOo.2.0.1.g07401
N
0.836
OFLC_0000734201
Onchocerca flexuosa
OFLC_0000734201
N
0.774
L892_g12859
Steinernema scapterisci
L892_g12859
N
0.754
RSKR_0000509700
Rhabditophanes kr3021
RSKR_0000509700
N
0.754
scaffold1066-EXSNAP2012.3
Pristionchus exspectatus
scaffold1066-EXSNAP2012.3
N
0.721
SMUV_0000429701
Syphacia muris
SMUV_0000429701
N
0.828
SPAL_0000243500
Strongyloides papillosus
SPAL_0000243500
N
0.762
SSTP_0000993700
Strongyloides stercoralis
SSTP_0000993700
N
0.762
SVE_0001100
Strongyloides venezuelensis
SVE_0001100
N
0.770
TCLT_0000997101
Thelazia callipaeda
TCLT_0000997101
N
0.857
TCNE_0000151101
Toxocara canis
TCNE_0000151101
N
0.779
TCNE_0000252101
Toxocara canis
TCNE_0000252101
N
0.825
ASIM_0001061401
Anisakis simplex
ASIM_0001061401
N
0.844
Bm4196
Brugia malayi
Bm4196
N
0.861
CBN28426
Caenorhabditis brenneri
CBN28426
N
0.967
CJA16887
Caenorhabditis japonica
CJA16887
N
0.984
CRE00936
Caenorhabditis remanei
CRE00936
N
0.984
LOAG_16508
Loa loa
LOAG_16508
N
0.849
Ppa-npax-4
Pristionchus pacificus
PPA03062
N
0.864
npax-2
Caenorhabditis elegans
WBGene00018591
N
0.975
WBGene00239907
Onchocerca volvulus
WBGene00239907
N
0.861
ACOC_0000909601
Angiostrongylus costaricensis
ACOC_0000909601
N
0.861
ALUE_0000006201
Ascaris lumbricoides
ALUE_0000006201
N
0.778
WUBG_05014
Wuchereria bancrofti
WUBG_05014
N
0.849
ASU_13814
Ascaris suum
ASU_13814
N
0.869
BTMF_0001047601
Brugia timori
BTMF_0001047601
N
0.783
BXY_0116700
Bursaphelenchus xylophilus
BXY_0116700
N
0.754
DICVIV_06612
Dictyocaulus viviparus
DICVIV_06612
N
0.885
EVEC_0001355301
Enterobius vermicularis
EVEC_0001355301
N
0.844
GPLIN_001118300
Globodera pallida
GPLIN_001118300
N
0.779
HPLM_0000886801
Haemonchus placei
HPLM_0000886801
N
0.916
L596_g148
Steinernema carpocapsae
L596_g148
N
0.754
L889_g31190
Steinernema feltiae
L889_g31190
N
0.754