CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30043472m.g
(
Saccoglossus kowalevskii
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
Sakowv30043472m.g
T312218_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23955638_peptide
Paired box
4
135
RTTKINISGREWIVGVPLGNDYRSVLVEELKKLRGDDGNALPRGAVSNCAQKFKVARSTVLAVWQRYCDTGSVSPRRRSTYRPTLLTDDDYRYIELLKTEHPSMSYEDIRQKLEENANVHVSNSTLCRAVRS
Links
Other
Paired box
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_18315
Phytophthora parasitica
F443_18315
N
fgenesh_masked-par_contig_1065-abinit-gene-0.12
Pythium arrhenomanes
fgenesh_masked-par_contig_1065-abinit-gene-0.12
N
fgenesh_scip_prom.28083.276
Phytophthora lateralis
fgenesh_scip_prom.28083.276
N
fgenesh_scip_prom.46568.8375
Phytophthora kernoviae
fgenesh_scip_prom.46568.8375
N
HpaG807077
Hyaloperonospora arabidopsidis
HpaG807077
N
maker-pag1_scaffold_194-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_194-fgenesh-gene-0.7
N
maker-pir_contig_292-snap-gene-0.21
Pythium irregulare
maker-pir_contig_292-snap-gene-0.21
N
maker-piw_contig_2716-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2716-fgenesh-gene-0.0
N
maker-pve_contig_37-snap-gene-0.50
Pythium vexans
maker-pve_contig_37-snap-gene-0.50
N
Phyra81124
Phytophthora ramorum
Phyra81124
N
Physo158880
Phytophthora sojae
Physo158880
N
PITG_18417
Phytophthora infestans
PITG_18417
N
PYU1_G001764
Pythium ultimum
PYU1_G001764
N