CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001109301
(
Haemonchus placei
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
HPLM_0001109301
T312725_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001109301-mRNA-1
Paired box
6
112
GIRNLRQDQVDAITRSLHAGLTSRQVSEIQGVTIRCIQRIWKKYKDTGSVEVKKHPGAARTTSRLVDRNIVRLARSDPRLTAAEILREISTPEGPNPSLSTVQRRLR
Links
Other
Paired box
family TFs
Other
Haemonchus placei
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK27085.1
Cannabis sativa
PK27085.1
D
anac075
Arabidopsis thaliana
AT4G29230
D
Cucsa.288680
Cucumis sativus
Cucsa.288680
I
Si001527m.g
Setaria italica
Si001527m.g
I
Cucsa.116800
Cucumis sativus
Cucsa.116800
I
cassava44586.m1
Manihot esculenta
cassava44586.m1
I
cassava11584.m1
Manihot esculenta
cassava11584.m1
I
29912.m005354
Ricinus communis
29912.m005354
I
Pm027280
Prunus mume
Pm027280
I
Cla017075
Citrullus lanatus
Cla017075
I
Cla011431
Citrullus lanatus
Cla011431
I
Ca_05913
Cicer arietinum
Ca_05913
I
VIT_11s0016g02880
Vitis vinifera
VIT_11s0016g02880
I
TRIUR3_33147
Triticum urartu
TRIUR3_33147
I
Traes_3DL_C686CE2E3
Triticum aestivum
Traes_3DL_C686CE2E3
I
Traes_3AL_41AC2099E1
Triticum aestivum
Traes_3AL_41AC2099E1
I
TCM_037747
Theobroma cacao
TCM_037747
I
Solyc05g026180.1
Solanum lycopersicum
Solyc05g026180.1
I
Gorai.009G028900
Gossypium raimondii
Gorai.009G028900
I
Thhalv10024980m.g
Eutrema salsugineum
Thhalv10024980m.g
I
SapurV1A.1259s0030
Salix purpurea
SapurV1A.1259s0030
I
SapurV1A.0212s0190
Salix purpurea
SapurV1A.0212s0190
I
Pavir.J13205
Panicum virgatum
Pavir.J13205
I
Pavir.Eb00261
Panicum virgatum
Pavir.Eb00261
I
orange1.1g012118m.g
Citrus sinensis
orange1.1g012118m.g
I
MDP0000124509
Malus domestica
MDP0000124509
I
Gorai.010G078900
Gossypium raimondii
Gorai.010G078900
I
Aquca_001_00211
Aquilegia coerulea
Aquca_001_00211
I
gene11344-v1.0-hybrid
Fragaria vesca
gene11344-v1.0-hybrid
I
evm.TU.supercontig_78.40
Carica papaya
evm.TU.supercontig_78.40
I
Eucgr.C00958
Eucalyptus grandis
Eucgr.C00958
I
Ciclev10010579m.g
Citrus clementina
Ciclev10010579m.g
I
Carubv10004602m.g
Capsella rubella
Carubv10004602m.g
I
Cagra.0495s0057
Capsella grandiflora
Cagra.0495s0057
I
Bostr.7867s0767
Boechera stricta
Bostr.7867s0767
I
GLYMA07G15180
Glycine max
GLYMA07G15180
I
Sb03g003170
Sorghum bicolor
Sb03g003170
I
GSMUA_Achr7G09510_001
Musa acuminata
GSMUA_Achr7G09510_001
I
GSMUA_Achr6G05480_001
Musa acuminata
GSMUA_Achr6G05480_001
I
GSMUA_Achr4G30940_001
Musa acuminata
GSMUA_Achr4G30940_001
I
GSMUA_Achr2G16590_001
Musa acuminata
GSMUA_Achr2G16590_001
I
GRMZM2G166721
Zea mays
GRMZM2G166721
I
GRMZM2G112681
Zea mays
GRMZM2G112681
I
GLYMA08G03590
Glycine max
GLYMA08G03590
I
GSMUA_AchrUn_randomG28610_001
Musa acuminata
GSMUA_AchrUn_randomG28610_001
I
GLYMA05G36031
Glycine max
GLYMA05G36031
I
GLYMA01G00880
Glycine max
GLYMA01G00880
I
anac075
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7001013
I
Bra024152
Brassica rapa
Bra024152
I
Bra011090
Brassica rapa
Bra011090
I
Bo7g113660
Brassica oleracea
Bo7g113660
I
Bo1g016630
Brassica oleracea
Bo1g016630
I
BGIOSGA002220
Oryza indica
BGIOSGA002220
I
ONIVA01G06690
Oryza nivara
ONIVA01G06690
I
POPTR_0006s15740
Populus trichocarpa
POPTR_0006s15740
I
PGSC0003DMG400016896
Solanum tuberosum
PGSC0003DMG400016896
I
OS01G0191300
Oryza sativa
OS01G0191300
I
ORUFI01G06380
Oryza rufipogon
ORUFI01G06380
I
ORGLA01G0055000
Oryza glaberrima
ORGLA01G0055000
I
OPUNC01G05680
Oryza punctata
OPUNC01G05680
I
POPTR_0018s06790
Populus trichocarpa
POPTR_0018s06790
I
LPERR01G05530
Leersia perrieri
LPERR01G05530
I
OLONG_008708
Oryza longistaminata
OLONG_008708
I
OGLUM01G06390
Oryza glumaepatula
OGLUM01G06390
I
OBART01G05840
Oryza barthii
OBART01G05840
I
OB01G15780
Oryza brachyantha
OB01G15780
I
MTR_8g102240
Medicago truncatula
MTR_8g102240
I
MLOC_66537
Hordeum vulgare
MLOC_66537
I
PRUPE_ppa004775mg
Prunus persica
PRUPE_ppa004775mg
I
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
mgf019352m
Mimulus guttatus
mgf019352m
N