CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCSADRAFT_64318
(
Bipolaris sorokiniana
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
COCSADRAFT_64318
T313445_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD68151
Pipsqueak
2
48
QSIDAALAAINALKPNEKLVYSQIAKKYGVDPGTLSRRHRGISRSRQ
Links
Other
Pipsqueak
family TFs
Other
Bipolaris sorokiniana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002288
Oryza indica
BGIOSGA002288
N
LPERR01G04460
Leersia perrieri
LPERR01G04460
N
OGLUM01G05200
Oryza glumaepatula
OGLUM01G05200
N
OMERI01G04770
Oryza meridionalis
OMERI01G04770
N
ONIVA01G05400
Oryza nivara
ONIVA01G05400
N
OPUNC01G04590
Oryza punctata
OPUNC01G04590
N
ORGLA01G0043900
Oryza glaberrima
ORGLA01G0043900
N
ORUFI01G05050
Oryza rufipogon
ORUFI01G05050
N