LCORL (Loxodonta africana)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSLAFG00000009691 T313568_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		0.988 0.988
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000008127 Pipsqueak 278 315
ENSLAFP00000008127 Pipsqueak 527 572

Links

Other Pipsqueak family TFs
Other Loxodonta africana TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Homo sapiens ENSG00000178177 D 0.976
LCORL Tursiops truncatus ENSTTRG00000016951 I 0.976
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I 0.988
LCORL Otolemur garnettii ENSOGAG00000005593 I 0.988
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I 0.988
LCORL Procavia capensis ENSPCAG00000007105 I 0.976
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I 0.988
LCORL Pan troglodytes ENSPTRG00000015943 I 0.988
LCORL Pteropus vampyrus ENSPVAG00000013601 I 0.976
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I 0.976
LCORL Sus scrofa ENSSSCG00000008748 I 0.988
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I 0.976
LCORL Taeniopygia guttata ENSTGUG00000009625 I 0.988
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I 0.976
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I 0.988
LCORL Vicugna pacos ENSVPAG00000010356 I 0.976
Aan_R007397 Calypte anna Aan_R007397 I 0.976
Afo_R006360 Aptenodytes forsteri Afo_R006360 I 0.988
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I 0.988
Brh_R013202 Buceros rhinoceros Brh_R013202 I 0.988
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I 0.988
ENSP00000371661 Macaca fascicularis ENSP00000371661 I 0.976
Gfo_R010322 Geospiza fortis Gfo_R010322 I 0.988
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I 0.976
Ogr00836 Ophisaurus gracilis Ogr00836 I 0.964
Pvit_18026 Pogona vitticeps Pvit_18026 I 0.988
Tal_R001804 Tyto alba Tal_R001804 I 0.988
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I 0.988
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I 0.976
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I 0.988
LCORL Bos taurus ENSBTAG00000046561 I 0.988
LCORL Canis familiaris ENSCAFG00000016672 I 0.988
LCORL Callithrix jacchus ENSCJAG00000012800 I 0.988
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I 0.988
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I 0.976
lcorl Danio rerio ENSDARG00000070098 I 0.812
LCORL Dasypus novemcinctus ENSDNOG00000001545 I 0.988
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I 0.976
LCORL Equus caballus ENSECAG00000000648 I 0.976
LCORL Erinaceus europaeus ENSEEUG00000000419 I 0.976
LCORL Anolis carolinensis ENSACAG00000002012 I 0.976
LCORL Felis catus ENSFCAG00000029474 I 0.976
LCORL Gallus gallus ENSGALG00000014421 I 0.988
LCORL Gorilla gorilla ENSGGOG00000014894 I 0.988
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I 0.976
LCORL Meleagris gallopavo ENSMGAG00000012554 I 0.988
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I 0.976
LCORL Myotis lucifugus ENSMLUG00000013781 I 0.976
LCORL Monodelphis domestica ENSMODG00000000757 I 0.988
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I 0.988
Lcorl Mus musculus ENSMUSG00000015882 I 0.988
ENSNLEG00000016679 Nomascus leucogenys ENSNLEG00000016679 I 0.976