L798_02803 (Zootermopsis nevadensis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 L798_02803 T313843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BtbVII
M03951_2.00 		Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY		 SELEX
Nitta et al.(2015)
BtbVII_1 		0.867 0.867
BtbVII
M03952_2.00 		Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT		 SELEX
Nitta et al.(2015)
BtbVII_2 		0.867 0.867
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR21742 Pipsqueak 386 431

Links

Other Pipsqueak family TFs
Other Zootermopsis nevadensis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB03G19990 Oryza brachyantha OB03G19990 N
ORUFI08G19690 Oryza rufipogon ORUFI08G19690 N
Sb01g041630 Sorghum bicolor Sb01g041630 N
SELMODRAFT_9106 Selaginella moellendorffii SELMODRAFT_9106 N
SELMODRAFT_9109 Selaginella moellendorffii SELMODRAFT_9109 N
TRIUR3_29419 Triticum urartu TRIUR3_29419 N
TRIUR3_32144 Triticum urartu TRIUR3_32144 N