CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_11724--NP_001011602.1_APIME
(
Camponotus floridanus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Cflo_11724--NP_001011602.1_APIME
T314427_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
142
185
TQEDMDAALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDT
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
196
238
SDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARKEGIR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
251
296
TPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
303
346
SEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEE
Links
Other
Pipsqueak
family TFs
Other
Camponotus floridanus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
crol
Drosophila melanogaster
FBgn0020309
D
0.000
MDOA010166
Musca domestica
MDOA010166
N
0.000