CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Hsal_00151--XP_001121063.1_APIME
(
Harpegnathos saltator
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Hsal_00151--XP_001121063.1_APIME
T314441_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bab1
M06440_2.00
Drosophila melanogaster
AAYAWWWATA
TATWAWTRTT
B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870
1.000
1.000
bab1
M06441_2.00
Drosophila melanogaster
KAATTAWATAW
WTATWTAATTM
B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870
1.000
1.000
bab1
M09690_2.00
Drosophila melanogaster
AHWAYWATAWAHAT
ATDTWTATWRTWDT
Misc
Kulakovskiy et al.(2009)
bab1
1.000
1.000
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_00151--XP_001121063.1_APIME
Pipsqueak
28
73
RPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGP
Links
Other
Pipsqueak
family TFs
Other
Harpegnathos saltator
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H101_04027
Trichophyton interdigitale
H101_04027
N
H102_05912
Trichophyton rubrum
H102_05912
N
H105_05952
Trichophyton soudanense
H105_05952
N
TESG_01326
Trichophyton tonsurans
TESG_01326
N