Myotis_brandtii_LCORL_10024397 (Myotis brandtii)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Myotis_brandtii_LCORL_10024397 T314457_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_LCORL_10024397 Pipsqueak 182 220
Myotis_brandtii_LCORL_10024397 Pipsqueak 431 476

Links

Other Pipsqueak family TFs
Other Myotis brandtii TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000010360 Pelodiscus sinensis ENSPSIG00000010360 I 0.000
nr1h2.L Xenopus laevis XB-GENE-864925 I 0.000
nr1h2 Xenopus tropicalis XB-GENE-482950 I 0.000
Pvit_08677 Pogona vitticeps Pvit_08677 I 0.000
Ogr17890 Ophisaurus gracilis Ogr17890 I 0.000
Gfo_R014176 Geospiza fortis Gfo_R014176 I 0.000
Cmyd_10014955 Chelonia mydas Cmyd_10014955 I 0.000
Brh_R002313 Buceros rhinoceros Brh_R002313 I 0.000
Alligator_sinensis_CCG017637.1 Alligator sinensis Alligator_sinensis_CCG017637.1 I 0.000
Alligator_sinensis_CCG016940.1 Alligator sinensis Alligator_sinensis_CCG016940.1 I 0.000
Afo_R002292 Aptenodytes forsteri Afo_R002292 I 0.000
ENSXMAG00000000014 Xiphophorus maculatus ENSXMAG00000000014 I 0.000
nr1h3 Takifugu rubripes ENSTRUG00000016403 I 0.000
nr1h3 Tetraodon nigroviridis ENSTNIG00000009590 I 0.000
ENSTGUG00000010475 Taeniopygia guttata ENSTGUG00000010475 I 0.000
NR1H3 Anolis carolinensis ENSACAG00000002940 I 0.000
ENSPFOG00000003798 Poecilia formosa ENSPFOG00000003798 I 0.000
nr1h3 Oryzias latipes ENSORLG00000001286 I 0.000
ENSONIG00000005828 Oreochromis niloticus ENSONIG00000005828 I 0.000
NR1H3 Meleagris gallopavo ENSMGAG00000010751 I 0.000
ENSLACG00000018964 Latimeria chalumnae ENSLACG00000018964 I 0.000
ENSLACG00000015170 Latimeria chalumnae ENSLACG00000015170 I 0.000
ENSGALG00000008202 Gallus gallus ENSGALG00000008202 I 0.000
nr1h3 Gasterosteus aculeatus ENSGACG00000017167 I 0.000
ENSFALG00000006313 Ficedula albicollis ENSFALG00000006313 I 0.000
nr1h3 Danio rerio ENSDARG00000098439 I 0.000
ENSAPLG00000010925 Anas platyrhynchos ENSAPLG00000010925 I 0.000
ENSAMXG00000006277 Astyanax mexicanus ENSAMXG00000006277 I 0.000
NR1H4 Anolis carolinensis ENSACAG00000012333 I 0.000