CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC000447
(
Leptinotarsa decemlineata
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
LDEC000447
T314522_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC000447-PA
Pipsqueak
334
377
TQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDT
LDEC000447-PA
Pipsqueak
388
414
TEENLNNALEALRTGTISANKASKAYA
LDEC000447-PA
Pipsqueak
433
478
TPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSR
LDEC000447-PA
Pipsqueak
485
527
SEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKY
Links
Other
Pipsqueak
family TFs
Other
Leptinotarsa decemlineata
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ013751
Culex pipiens
CpipJ_CPIJ013751
N
0.841
ACEP17011
Atta cephalotes
ACEP17011
N
0.885
CPIJ013751
Culex quinquefasciatus
CPIJ013751
N
0.841
psq
Drosophila melanogaster
FBgn0263102
N
0.815
GB53296
Apis mellifera
GB53296
N
0.866
KGM_10298
Danaus plexippus
KGM_10298
N
0.783
NV10789
Nasonia vitripennis
NV10789
N
0.834
PHUM042120
Pediculus humanus
PHUM042120
N
0.885
SINV11439
Solenopsis invicta
SINV11439
N
0.885
TC003349
Tribolium castaneum
TC003349
N
0.839
YQE_09795
Dendroctonus ponderosae
YQE_09795
N
0.981
Cflo_11724--NP_001011602.1_APIME
Camponotus floridanus
Cflo_11724--NP_001011602.1_APIME
N
0.814
Hsal_00649--NP_001011602.1_APIME
Harpegnathos saltator
Hsal_00649--NP_001011602.1_APIME
N
0.866
CLEC025389
Cimex lectularius
CLEC025389
N
0.796
MDOA013217
Musca domestica
MDOA013217
N
0.815