CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AFUN010125
(
Anopheles funestus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
AFUN010125
T314892_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFUN010125-PA
Pipsqueak
595
638
TAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDT
AFUN010125-PA
Pipsqueak
649
690
NEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGI
AFUN010125-PA
Pipsqueak
704
749
SAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSR
AFUN010125-PA
Pipsqueak
756
800
SEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTP
Links
Other
Pipsqueak
family TFs
Other
Anopheles funestus
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003083
Oryza indica
BGIOSGA003083
N
LPERR01G07860
Leersia perrieri
LPERR01G07860
N
MLOC_25058
Hordeum vulgare
MLOC_25058
N
OS01G0234100
Oryza sativa
OS01G0234100
N
Traes_2AS_FC3F1F39A
Triticum aestivum
Traes_2AS_FC3F1F39A
N
Traes_2DS_6584E8617
Triticum aestivum
Traes_2DS_6584E8617
N
Traes_3AS_16C02FAE7
Triticum aestivum
Traes_3AS_16C02FAE7
N
Traes_3B_30A3E17C6
Triticum aestivum
Traes_3B_30A3E17C6
N
Traes_3DS_ECB844CBC
Triticum aestivum
Traes_3DS_ECB844CBC
N
Pavir.Ea00041
Panicum virgatum
Pavir.Ea00041
N
Pavir.Eb00031
Panicum virgatum
Pavir.Eb00031
N