L898_g31322 (Steinernema monticolum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 L898_g31322 T315067_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g31322.t1 Pipsqueak 262 306
L898_g31322.t1 Pipsqueak 421 465

Links

Other Pipsqueak family TFs
Other Steinernema monticolum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G09100 Oryza punctata OPUNC01G09100 N
Pavir.J24144 Panicum virgatum Pavir.J24144 N
Pavir.J04809 Panicum virgatum Pavir.J04809 N
Aquca_057_00077 Aquilegia coerulea Aquca_057_00077 N
TRAES3BF003800040CFD_g Triticum aestivum TRAES3BF003800040CFD_g N
Traes_3AS_D1FC86E9B Triticum aestivum Traes_3AS_D1FC86E9B N
Si036653m.g Setaria italica Si036653m.g N
Si002505m.g Setaria italica Si002505m.g N
Sb03g000260 Sorghum bicolor Sb03g000260 N
OS01G0246500 Oryza sativa OS01G0246500 N
ORUFI01G10030 Oryza rufipogon ORUFI01G10030 N
ORGLA01G0083700 Oryza glaberrima ORGLA01G0083700 N
AC233880.1_FG006 Zea mays AC233880.1_FG006 N
ONIVA01G11810 Oryza nivara ONIVA01G11810 N
OMERI01G09230 Oryza meridionalis OMERI01G09230 N
OGLUM01G10590 Oryza glumaepatula OGLUM01G10590 N
OBART01G09250 Oryza barthii OBART01G09250 N
OB01G19360 Oryza brachyantha OB01G19360 N
LPERR01G08830 Leersia perrieri LPERR01G08830 N
F775_29714 Aegilops tauschii F775_29714 N
BRADI2G08600 Brachypodium distachyon BRADI2G08600 N
BGIOSGA002005 Oryza indica BGIOSGA002005 N
AMTR_s00069p00159620 Amborella trichopoda AMTR_s00069p00159620 N