CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PROX2
(
Homo sapiens
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSG00000119608
T316464_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.727
0.727
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.727
0.727
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.727
0.727
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000451223
Prospero
439
592
GLNPGHLKKAKLMFFFTRYPSSNLLKVYFPDVQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDGVTNPKMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKSSSYPQ
ENSP00000451463
Prospero
233
365
AVSQAVDSVLQKFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDGVTNPKMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKSSSYPQ
Links
Other
Prospero
family TFs
Other
Homo sapiens
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPRG_00677
Saprolegnia parasitica
SPRG_00677
N
0.000
ALNC14_038710
Albugo laibachii
ALNC14_038710
N
0.000
ALNC14_045170
Albugo laibachii
ALNC14_045170
N
0.000
F443_08670
Phytophthora parasitica
F443_08670
N
0.000
fgenesh_scip_prom.46568.4406
Phytophthora kernoviae
fgenesh_scip_prom.46568.4406
N
0.000
HpaG811065
Hyaloperonospora arabidopsidis
HpaG811065
N
0.000
maker-pag1_scaffold_818-snap-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_818-snap-gene-0.3
N
0.000
maker-pir_contig_67-snap-gene-0.23
Pythium irregulare
maker-pir_contig_67-snap-gene-0.23
N
0.000
maker-pve_contig_870-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_870-fgenesh-gene-0.0
N
0.000
Phyra86538
Phytophthora ramorum
Phyra86538
N
0.000
Physo140839
Phytophthora sojae
Physo140839
N
0.000
PITG_06748
Phytophthora infestans
PITG_06748
N
0.000
PYU1_G010470
Pythium ultimum
PYU1_G010470
N
0.000
estExt_Genewise1.C_70435
Phytophthora capsici
estExt_Genewise1.C_70435
N
0.000