CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox1.L
(
Xenopus laevis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
XB-GENE-485331
T316669_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.954
0.954
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.954
0.954
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.954
0.954
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAC28353
Prospero
1
131
PNHFKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMERYARQAINDGITSTEELCITRDCELYRALNMHYNKANNFEVPERFLEVAQITLRESFNAIIAGKDVDPSWKKAIYK
BAB17310
Prospero
582
735
GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGITSTEELCITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKNAIYKVICKLDSEVPDIFRSPNCLQ
Links
Other
Prospero
family TFs
Other
Xenopus laevis
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_73358
Bipolaris maydis
COCC4DRAFT_73358
N
COCCADRAFT_31661
Bipolaris zeicola
COCCADRAFT_31661
N
COCMIDRAFT_22708
Bipolaris oryzae
COCMIDRAFT_22708
N
COCSADRAFT_167842
Bipolaris sorokiniana
COCSADRAFT_167842
N
COCVIDRAFT_33378
Bipolaris victoriae
COCVIDRAFT_33378
N
LEMA_P094790.1
Leptosphaeria maculans
LEMA_P094790.1
N
MYCFIDRAFT_96026
Pseudocercospora fijiensis
MYCFIDRAFT_96026
N
PTRG_03180
Pyrenophora triticirepentis
PTRG_03180
N
PTT_11463
Pyrenophora teres
PTT_11463
N
PV09_08081
Verruconis gallopava
PV09_08081
N
SETTUDRAFT_45865
Setosphaeria turcica
SETTUDRAFT_45865
N
W97_08202
Coniosporium apollinis
W97_08202
N
estExt_fgenesh1_pg.C_60133
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_60133
N
estExt_fgenesh1_pm.C_100134
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_100134
N
estExt_fgenesh2_pg.C_80410
Neurospora discreta
estExt_fgenesh2_pg.C_80410
N
AB02466.1
Alternaria brassicicola
AB02466.1
N