CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf00605-augustus-gene-0.8
(
Meloidogyne floridensis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
maker-nMf.1.1.scaf00605-augustus-gene-0.8
T316763_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00605-augustus-gene-0.8-mRNA-1
Prospero
609
762
QLTHVHLRKAKLMFFYQRYPSSSVLKSYFPDVQFNKHNTAQLVKWFSNFREFYYMQMEKFAKQALAEGVNHQEELIVTTESEIFKQLNQHYNKNNVFEPPERLLFVVQETLREFFSALQQQKDLEPSWKKSIYKIIQQLDEPIPDYFRDFQFVE
Links
Other
Prospero
family TFs
Other
Meloidogyne floridensis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_02805
Trichuris suis
D918_02805
I
0.800
SVE_0442300
Strongyloides venezuelensis
SVE_0442300
I
0.721
SSTP_0000359900
Strongyloides stercoralis
SSTP_0000359900
I
0.708
SPAL_0001624500
Strongyloides papillosus
SPAL_0001624500
I
0.721
PTRK_0001568700
Parastrongyloides trichosuri
PTRK_0001568700
I
0.727
nAv.1.0.1.g04749
Acanthocheilonema viteae
nAv.1.0.1.g04749
I
0.727
L898_g8569
Steinernema monticolum
L898_g8569
I
0.708
L893_g28279
Steinernema glaseri
L893_g28279
I
0.708
L892_g25141
Steinernema scapterisci
L892_g25141
I
0.714
L889_g22574
Steinernema feltiae
L889_g22574
I
0.714
L596_g9976
Steinernema carpocapsae
L596_g9976
I
0.708
SINV18378
Solenopsis invicta
SINV18378
I
0.800
ASTEI07078
Anopheles stephensi
ASTEI07078
I
0.709
AMIN002618
Anopheles minimus
AMIN002618
I
0.800
AEPI001687
Anopheles epiroticus
AEPI001687
I
0.800
ACUA003826
Anopheles culicifacies
ACUA003826
I
0.800
ACHR007729
Anopheles christyi
ACHR007729
I
0.702
AARA009757
Anopheles arabiensis
AARA009757
I
0.800
Cflo_00868--XP_392355.3_APIME
Camponotus floridanus
Cflo_00868--XP_392355.3_APIME
I
0.800
YQE_10516
Dendroctonus ponderosae
YQE_10516
I
0.800
BXY_0618400
Bursaphelenchus xylophilus
BXY_0618400
N
0.701
snap_masked-nMf.1.1.scaf00509-processed-gene-0.6
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00509-processed-gene-0.6
N
0.710
Minc12662
Meloidogyne incognita
Minc12662
N
1.000