ENSTNIG00000003611 (Tetraodon nigroviridis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSTNIG00000003611 T317540_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.759 0.759
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.759 0.759
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.759 0.759
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.759 0.759
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.759 0.759
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.759 0.759
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.759 0.759
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.759 0.759
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.759 0.759
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.759 0.759
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.759 0.759
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.752 0.752
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.752 0.752
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.752 0.752
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.752 0.752
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.752 0.752
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.752 0.752
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.752 0.752
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.752 0.752
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.752 0.752
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.752 0.752
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.745 0.745
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.745 0.745
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.745 0.745
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.745 0.745
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.745 0.745
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.745 0.745
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.745 0.745
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.745 0.745
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.745 0.745
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.745 0.745
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.745 0.745
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.745 0.745
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.738 0.738
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.738 0.738
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.724 0.724
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.724 0.724
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.724 0.724
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.724 0.724
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.724 0.724
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.724 0.724
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.724 0.724
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.724 0.724
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.724 0.724
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.724 0.724
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.724 0.724
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.724 0.724
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.724 0.724
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.724 0.724
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006205 Rel 43 208

Links

Other Rel family TFs
Other Tetraodon nigroviridis TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MXI1 Homo sapiens ENSG00000119950 D 0.000
Mxi1 Mus musculus ENSMUSG00000025025 D 0.000
ACYPI005198 Acyrthosiphon pisum ACYPI005198 I 0.000
EFV61981 Trichinella spiralis EFV61981 I 0.000
MXD1 Anolis carolinensis ENSACAG00000006004 I 0.000
MXI1 Anolis carolinensis ENSACAG00000006009 I 0.000
ENSAMEG00000005262 Ailuropoda melanoleuca ENSAMEG00000005262 I 0.000
ENSAMEG00000016108 Ailuropoda melanoleuca ENSAMEG00000016108 I 0.000
ENSAMXG00000004433 Astyanax mexicanus ENSAMXG00000004433 I 0.000
ENSAPLG00000004350 Anas platyrhynchos ENSAPLG00000004350 I 0.000
MXD1 Bos taurus ENSBTAG00000001042 I 0.000
MXI1 Bos taurus ENSBTAG00000017263 I 0.000
MXI1 Canis familiaris ENSCAFG00000010706 I 0.000
MXD1 Canis familiaris ENSCAFG00000032746 I 0.000
MXD1 Choloepus hoffmanni ENSCHOG00000003047 I 0.000
MXI1 Choloepus hoffmanni ENSCHOG00000006556 I 0.000
MXI1 Callithrix jacchus ENSCJAG00000018614 I 0.000
MXD1 Callithrix jacchus ENSCJAG00000019266 I 0.000
ENSCPOG00000000336 Cavia porcellus ENSCPOG00000000336 I 0.000
ENSCPOG00000007162 Cavia porcellus ENSCPOG00000007162 I 0.000
MXI1 Cavia porcellus ENSCPOG00000022901 I 0.000
ENSCSAG00000005171 Chlorocebus sabaeus ENSCSAG00000005171 I 0.000
ENSCSAG00000015119 Chlorocebus sabaeus ENSCSAG00000015119 I 0.000
mxi1 Danio rerio ENSDARG00000040884 I 0.000
MXI1 Dasypus novemcinctus ENSDNOG00000002479 I 0.000
MXD1 Dasypus novemcinctus ENSDNOG00000034010 I 0.000
Mxi1 Dipodomys ordii ENSDORG00000005656 I 0.000
MXD1 Equus caballus ENSECAG00000011257 I 0.000
MXD1 Echinops telfairi ENSETEG00000017347 I 0.000
ENSFALG00000002308 Ficedula albicollis ENSFALG00000002308 I 0.000
MXI1 Felis catus ENSFCAG00000004882 I 0.000
MXD1 Felis catus ENSFCAG00000030345 I 0.000
MXD1 Homo sapiens ENSG00000059728 I 0.000
mxd1 Gasterosteus aculeatus ENSGACG00000013215 I 0.000
MXI1 Gallus gallus ENSGALG00000008555 I 0.000
MXD1 Gallus gallus ENSGALG00000013882 I 0.000
MXD1 Gorilla gorilla ENSGGOG00000011287 I 0.000
MXI1 Gorilla gorilla ENSGGOG00000013614 I 0.000
ENSLACG00000017438 Latimeria chalumnae ENSLACG00000017438 I 0.000
MXI1 Loxodonta africana ENSLAFG00000014348 I 0.000
ENSLOCG00000012358 Lepisosteus oculatus ENSLOCG00000012358 I 0.000
ENSLOCG00000015320 Lepisosteus oculatus ENSLOCG00000015320 I 0.000
ENSMEUG00000013693 Macropus eugenii ENSMEUG00000013693 I 0.000
MXD1 Meleagris gallopavo ENSMGAG00000003405 I 0.000
MXI1 Meleagris gallopavo ENSMGAG00000010768 I 0.000
ENSMMUG00000010226 Macaca mulatta ENSMMUG00000010226 I 0.000
MXI1 Macaca mulatta ENSMMUG00000014350 I 0.000
MXI1 Monodelphis domestica ENSMODG00000010546 I 0.000
MXD1 Monodelphis domestica ENSMODG00000011481 I 0.000
ENSMPUG00000002095 Mustela putorius furo ENSMPUG00000002095 I 0.000
ENSMPUG00000007107 Mustela putorius furo ENSMPUG00000007107 I 0.000
Mxd1 Mus musculus ENSMUSG00000001156 I 0.000
ENSNLEG00000010141 Nomascus leucogenys ENSNLEG00000010141 I 0.000
ENSNLEG00000015457 Nomascus leucogenys ENSNLEG00000015457 I 0.000
MXI1 Ornithorhynchus anatinus ENSOANG00000001600 I 0.000
ENSOARG00000009456 Ovis aries ENSOARG00000009456 I 0.000
ENSOARG00000019742 Ovis aries ENSOARG00000019742 I 0.000
MXD1 Oryctolagus cuniculus ENSOCUG00000015820 I 0.000
MXI1 Otolemur garnettii ENSOGAG00000000570 I 0.000
MXD1 Otolemur garnettii ENSOGAG00000008412 I 0.000
ENSONIG00000000432 Oreochromis niloticus ENSONIG00000000432 I 0.000
ENSONIG00000015871 Oreochromis niloticus ENSONIG00000015871 I 0.000
ENSONIG00000016308 Oreochromis niloticus ENSONIG00000016308 I 0.000
MXI1 Oryzias latipes ENSORLG00000005955 I 0.000
mxi1 Oryzias latipes ENSORLG00000015172 I 0.000
mxd1 Oryzias latipes ENSORLG00000015461 I 0.000
ENSPANG00000000314 Papio anubis ENSPANG00000000314 I 0.000
ENSPANG00000020804 Papio anubis ENSPANG00000020804 I 0.000
MXD1 Procavia capensis ENSPCAG00000001189 I 0.000
ENSPFOG00000004367 Poecilia formosa ENSPFOG00000004367 I 0.000
ENSPFOG00000017086 Poecilia formosa ENSPFOG00000017086 I 0.000
ENSPFOG00000021922 Poecilia formosa ENSPFOG00000021922 I 0.000
ENSPMAG00000001074 Petromyzon marinus ENSPMAG00000001074 I 0.000
ENSPPYG00000012331 Pongo abelii ENSPPYG00000012331 I 0.000
ENSPSIG00000012742 Pelodiscus sinensis ENSPSIG00000012742 I 0.000
MXI1 Pan troglodytes ENSPTRG00000002936 I 0.000
MXD1 Pan troglodytes ENSPTRG00000012023 I 0.000
MXD1 Pteropus vampyrus ENSPVAG00000001244 I 0.000
MXI1 Pteropus vampyrus ENSPVAG00000014983 I 0.000
Mxd1 Rattus norvegicus ENSRNOG00000017720 I 0.000
Mxi1 Rattus norvegicus ENSRNOG00000034078 I 0.000
MXD1 Sorex araneus ENSSARG00000004728 I 0.000
ENSSHAG00000005374 Sarcophilus harrisii ENSSHAG00000005374 I 0.000
MXD1 Sus scrofa ENSSSCG00000008334 I 0.000
ENSSTOG00000000718 Ictidomys tridecemlineatus ENSSTOG00000000718 I 0.000
ENSSTOG00000025776 Ictidomys tridecemlineatus ENSSTOG00000025776 I 0.000
MXD1 Tupaia belangeri ENSTBEG00000005535 I 0.000
ENSTBEG00000017602 Tupaia belangeri ENSTBEG00000017602 I 0.000
ENSTGUG00000010598 Taeniopygia guttata ENSTGUG00000010598 I 0.000
mxd1 Tetraodon nigroviridis ENSTNIG00000000414 I 0.000
MXI1 Tetraodon nigroviridis ENSTNIG00000013330 I 0.000
MXI1 Takifugu rubripes ENSTRUG00000006785 I 0.000
MXI1 Tursiops truncatus ENSTTRG00000007895 I 0.000
MXD1 Vicugna pacos ENSVPAG00000001762 I 0.000
MXI1 Vicugna pacos ENSVPAG00000003400 I 0.000
ENSXMAG00000004566 Xiphophorus maculatus ENSXMAG00000004566 I 0.000
ENSXMAG00000007056 Xiphophorus maculatus ENSXMAG00000007056 I 0.000
ENSXMAG00000012758 Xiphophorus maculatus ENSXMAG00000012758 I 0.000
NV10716 Nasonia vitripennis NV10716 I 0.000
RPRC006485 Rhodnius prolixus RPRC006485 I 0.000
tetur09g05570 Tetranychus urticae tetur09g05570 I 0.000
Afo_R002778 Aptenodytes forsteri Afo_R002778 I 0.000
Alligator_sinensis_CCG019430.1 Alligator sinensis Alligator_sinensis_CCG019430.1 I 0.000
Cmyd_10006239 Chelonia mydas Cmyd_10006239 I 0.000
ENSBTAP00000048182-D1 Bos grunniens ENSBTAP00000048182-D1 I 0.000
ENSP00000264444-D1 Bos grunniens ENSP00000264444-D1 I 0.000
ENSP00000264444 Macaca fascicularis ENSP00000264444 I 0.000
ENSP00000331152 Macaca fascicularis ENSP00000331152 I 0.000
Gfo_R002259 Geospiza fortis Gfo_R002259 I 0.000
Myotis_brandtii_Mxi1_10027965 Myotis brandtii Myotis_brandtii_Mxi1_10027965 I 0.000
Ogr05439 Ophisaurus gracilis Ogr05439 I 0.000
Ogr11151 Ophisaurus gracilis Ogr11151 I 0.000
Pvit_06637 Pogona vitticeps Pvit_06637 I 0.000
Pvit_07222 Pogona vitticeps Pvit_07222 I 0.000
Tal_R006513 Tyto alba Tal_R006513 I 0.000
fgenesh2_pg.scaffold_205000025 Branchiostoma floridae fgenesh2_pg.scaffold_205000025 I 0.000
Sakowv30007563m.g Saccoglossus kowalevskii Sakowv30007563m.g I 0.000
mxi1 Xenopus tropicalis XB-GENE-493086 I 0.000
ENSAPLG00000009927 Anas platyrhynchos ENSAPLG00000009927 N 0.000
mxd1 Danio rerio ENSDARG00000032039 N 0.000
MXD1 Myotis lucifugus ENSMLUG00000016646 N 0.000
ENSPSIG00000014955 Pelodiscus sinensis ENSPSIG00000014955 N 0.000
Aan_R005501 Calypte anna Aan_R005501 N 0.000
Myotis_brandtii_Mxd1_10023164 Myotis brandtii Myotis_brandtii_Mxd1_10023164 N 0.000
mxd1 Xenopus tropicalis XB-GENE-943715 N 0.000
mxd1.L Xenopus laevis XB-GENE-943720 N 0.000
D918_00272 Trichuris suis D918_00272 N 0.000
TMUE_s0057007400 Trichuris muris TMUE_s0057007400 N 0.000
TTRE_0000765101 Trichuris trichiura TTRE_0000765101 N 0.000