CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rel
(
Drosophila melanogaster
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
FBgn0014018
T317602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M03957_2.00
Drosophila melanogaster
NGGGGRTTCCCCB
VGGGGAAYCCCCN
SELEX
Nitta et al.(2015)
Rel_1
(Direct)
(Direct)
Rel
M03958_2.00
Drosophila melanogaster
GGGGGTTCCCCB
VGGGGAACCCCC
SELEX
Nitta et al.(2015)
Rel_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0088375
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088971
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088972
Rel
40
223
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
FBpp0088973
Rel
152
335
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNR
Links
Other
Rel
family TFs
Other
Drosophila melanogaster
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PMAA_044660
Talaromyces marneffei
PMAA_044660
N
PMAA_044660
Penicillium marneffei
PMAA_044660
N
fgenesh1_pg.sca_3_chr4_2_0000778
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000778
N
estExt_fgenesh1_pg.C_10519
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10519
N
Z518_05670
Rhinocladiella mackenziei
Z518_05670
N
X797_001626
Metarhizium robertsii
X797_001626
N
UV8b_7991
Ustilaginoidea virens
UV8b_7991
N
PV08_08241
Exophiala spinifera
PV08_08241
N
PV06_09810
Exophiala oligosperma
PV06_09810
N
PV05_08167
Exophiala xenobiotica
PV05_08167
N
BDDG_06791
Blastomyces dermatitidis
BDDG_06791
N
MGU_01815
Metarhizium guizhouense
MGU_01815
N
MBR_01140
Metarhizium brunneum
MBR_01140
N
MANI_008594
Metarhizium anisopliae
MANI_008594
N
MAM_02440
Metarhizium album
MAM_02440
N
MAJ_01124
Metarhizium majus
MAJ_01124
N
MAC_00374
Metarhizium acridum
MAC_00374
N
HMPREF1541_08601
Cyphellophora europaea
HMPREF1541_08601
N
EPUS_07403
Endocarpon pusillum
EPUS_07403
N