CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Gfo_R008165 *(Geospiza fortis)* Rel
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00554 (RHD_DNA_bind)	IPR011539	Gfo_R008165	T317786_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Rel M09353_2.00	Mus musculus	TGKVMTTYCCCHDBH	DVHDGGGRAAKBMCA	Misc Kulakovskiy et al.(2013) REL_MOUSE.H11MO.0.A	0.805	0.805
REL M02710_2.00	Homo sapiens	BGGRNWTTCC	GGAAWNYCCV	SELEX Mathelier et al.(2014) MA0101.1	0.799	0.799
REL M09350_2.00	Homo sapiens	TGKVMTTYCCCHDBH	DVHDGGGRAAKBMCA	Misc Kulakovskiy et al.(2013) REL_HUMAN.H11MO.0.B	0.799	0.799
REL M11235_2.00	Homo sapiens	BGGRNWTTCC	GGAAWNYCCV	Transfac Matys et al.(2006) V$CREL_01	0.799	0.799
REL M11236_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CREL_Q6	0.799	0.799
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Gfo_R008165	Rel	7	175	IEIFEQPRQRGMRFRYKCEGRSAGSIPGEHSTENNKTFPSIQILNYFGKIKIRTTLVTKNEPYKPHPHDLVGKDCRDGYYEAEFGPERRVLSFQNLGIQCVKKKDLKESISLRISKKINPFNVPEEQLHNIDEYDLNVVRLCFQAFLPDEHGNYSIALPPLISNPIYDN

Links
Other Rel family TFs
Other *Geospiza fortis* TFs