fgenesh1_pg.C_scaffold_2000774 (Phanerochaete chrysosporium)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 fgenesh1_pg.C_scaffold_2000774 T319037_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.651 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.651 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.651 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.651 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.651 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2000774 RFX 219 297

Links

Other RFX family TFs
Other Phanerochaete chrysosporium TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PFICI_03421 Pestalotiopsis fici PFICI_03421 N
Z519_01369 Cladophialophora bantiana Z519_01369 N
Z518_06873 Rhinocladiella mackenziei Z518_06873 N
Z517_03292 Fonsecaea pedrosoi Z517_03292 N
X797_008429 Metarhizium robertsii X797_008429 N
TSTA_117390 Talaromyces stipitatus TSTA_117390 N
SPBR_06706 Sporothrix brasiliensis SPBR_06706 N
SPBR_02521 Sporothrix brasiliensis SPBR_02521 N
SEPMUDRAFT_150769 Sphaerulina musiva SEPMUDRAFT_150769 N
PV11_06930 Exophiala sideris PV11_06930 N
PV10_08232 Exophiala mesophila PV10_08232 N
PV09_03952 Verruconis gallopava PV09_03952 N
PV08_08390 Exophiala spinifera PV08_08390 N
PV06_09975 Exophiala oligosperma PV06_09975 N
PV05_08566 Exophiala xenobiotica PV05_08566 N
PV04_08134 Capronia semiimmersa PV04_08134 N
A1O3_06639 Capronia epimyces A1O3_06639 N
MYCFIDRAFT_167080 Pseudocercospora fijiensis MYCFIDRAFT_167080 N
MGU_07913 Metarhizium guizhouense MGU_07913 N
MBR_10279 Metarhizium brunneum MBR_10279 N
MANI_018902 Metarhizium anisopliae MANI_018902 N
MAJ_09511 Metarhizium majus MAJ_09511 N
HMPREF1624_02633 Sporothrix schenckii HMPREF1624_02633 N
HMPREF1624_01047 Sporothrix schenckii HMPREF1624_01047 N
G647_02424 Cladophialophora carrionii G647_02424 N
DOTSEDRAFT_71961 Dothistroma septosporum DOTSEDRAFT_71961 N
BBA_08755 Beauveria bassiana BBA_08755 N
BAUCODRAFT_75640 Baudoinia compniacensis BAUCODRAFT_75640 N
A1O9_12701 Exophiala aquamarina A1O9_12701 N
A1O7_07661 Cladophialophora yegresii A1O7_07661 N
A1O5_02111 Cladophialophora psammophila A1O5_02111 N
A1O3_09122 Capronia epimyces A1O3_09122 N