AAEL006167 (Aedes aegypti)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 AAEL006167 T319284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.831 0.831
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.723 0.723
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.723 0.723
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.723 0.723
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAEL006167-PA Runt 26 155

Links

Other Runt family TFs
Other Aedes aegypti TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_22941 Cicer arietinum Ca_22941 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
OS08G0535800 Oryza sativa OS08G0535800 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
OPUNC08G19870 Oryza punctata OPUNC08G19870 N 0.000
Cucsa.157080 Cucumis sativus Cucsa.157080 N 0.000
mgf006124m Mimulus guttatus mgf006124m N 0.000
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N 0.000
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N 0.000
Lus10032004.g Linum usitatissimum Lus10032004.g N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
OBART08G21800 Oryza barthii OBART08G21800 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
BGIOSGA029063 Oryza indica BGIOSGA029063 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OLONG_020119 Oryza longistaminata OLONG_020119 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
ONIVA08G24840 Oryza nivara ONIVA08G24840 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000