ENSCSAG00000008703 (Chlorocebus sabaeus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSCSAG00000008703 T319355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		1.000 1.000
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		1.000 1.000
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		1.000 1.000
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		1.000 1.000
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		1.000 1.000
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		1.000 1.000
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		1.000 1.000
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		1.000 1.000
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		1.000 1.000
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		1.000 1.000
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		1.000 1.000
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		1.000 1.000
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.931 0.931
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.931 0.931
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.931 0.931
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.931 0.931
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.931 0.931
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.931 0.931
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.931 0.931
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.931 0.931
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.931 0.931
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.931 0.931
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.931 0.931
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.931 0.931
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.923 0.923
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.923 0.923
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.923 0.923
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.923 0.923
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.923 0.923
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.923 0.923
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.923 0.923
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.923 0.923
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.923 0.923
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.923 0.923
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.923 0.923
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.923 0.923
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.731 0.731
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.731 0.731
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.731 0.731
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000004965 Runt 54 183

Links

Other Runt family TFs
Other Chlorocebus sabaeus TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTT_19158 Pyrenophora teres PTT_19158 N
PV11_07499 Exophiala sideris PV11_07499 N
PV10_08386 Exophiala mesophila PV10_08386 N
PV09_02515 Verruconis gallopava PV09_02515 N
PV08_08264 Exophiala spinifera PV08_08264 N
PV07_03595 Cladophialophora immunda PV07_03595 N
PV06_09792 Exophiala oligosperma PV06_09792 N
PV05_07936 Exophiala xenobiotica PV05_07936 N
PV04_06640 Capronia semiimmersa PV04_06640 N
PVAR5_5269 Byssochlamys spectabilis PVAR5_5269 N
PMAA_044190 Talaromyces marneffei PMAA_044190 N
PITC_041460 Penicillium italicum PITC_041460 N
PEX1_080880 Penicillium expansum PEX1_080880 N
PDIP_06290 Penicillium digitatum PDIP_06290 N
PDE_07134 Penicillium oxalicum PDE_07134 N
PCH_Pc16g04990 Penicillium rubens PCH_Pc16g04990 N
PABG_03309 Paracoccidioides brasiliensis PABG_03309 N
Z517_01100 Fonsecaea pedrosoi Z517_01100 N
PMAA_044190 Penicillium marneffei PMAA_044190 N
Pc16g04990 Penicillium chrysogenum Pc16g04990 N
e_gw1.00083.764.1 Aspergillus carbonarius e_gw1.00083.764.1 N
AB07446.1 Alternaria brassicicola AB07446.1 N
fgenesh1_pg.C_chr_1000684 Mycosphaerella graminicola fgenesh1_pg.C_chr_1000684 N
estExt_fgenesh1_pg.C_60339 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_60339 N
Z519_03829 Cladophialophora bantiana Z519_03829 N
Z518_05886 Rhinocladiella mackenziei Z518_05886 N
PAAG_02847 Paracoccidioides sp lutzii PAAG_02847 N
W97_00661 Coniosporium apollinis W97_00661 N
UREG_03431 Uncinocarpus reesii UREG_03431 N
UCRNP2_7173 Neofusicoccum parvum UCRNP2_7173 N
U727_00434201141 Penicillium solitum U727_00434201141 N
SNOG_07076 Phaeosphaeria nodorum SNOG_07076 N
SETTUDRAFT_97536 Setosphaeria turcica SETTUDRAFT_97536 N
SEPMUDRAFT_57399 Sphaerulina musiva SEPMUDRAFT_57399 N
BDDG_03698 Blastomyces dermatitidis BDDG_03698 N
ATEG_00214 Aspergillus terreus CADATEAG00007510 N
ATEG_09947 Aspergillus terreus CADATEAG00004807 N
CADAORAG00009178 Aspergillus oryzae CADAORAG00009178 N
ANIA_01251 Aspergillus nidulans CADANIAG00001372 N
CADANGAG00006531 Aspergillus niger CADANGAG00006531 N
AFUA_1G10230 Aspergillus fumigatus CADAFUAG00007490 N
CADAFLAG00008370 Aspergillus flavus CADAFLAG00008370 N
ACLA_025300 Aspergillus clavatus CADACLAG00002259 N
NFIA_015420 Neosartorya fischeri CADNFIAG00001414 N
BAUCODRAFT_21037 Baudoinia compniacensis BAUCODRAFT_21037 N
A1O9_11203 Exophiala aquamarina A1O9_11203 N
A1O7_06234 Cladophialophora yegresii A1O7_06234 N
A1O5_08825 Cladophialophora psammophila A1O5_08825 N
A1O3_09974 Capronia epimyces A1O3_09974 N
A1O1_06617 Capronia coronata A1O1_06617 N
SNOG_07076 Stagonospora nodorum SNOG_07076 N
G647_06297 Cladophialophora carrionii G647_06297 N
Mycgr3G89267 Zymoseptoria tritici Mycgr3G89267 N
MPH_05165 Macrophomina phaseolina MPH_05165 N
M437DRAFT_53247 Aureobasidium melanogenum M437DRAFT_53247 N
M437DRAFT_31363 Aureobasidium melanogenum M437DRAFT_31363 N
LEMA_P051020.1 Leptosphaeria maculans LEMA_P051020.1 N
HMPREF1541_08743 Cyphellophora europaea HMPREF1541_08743 N
HMPREF1120_04173 Exophiala dermatitidis HMPREF1120_04173 N
HCBG_03270 Histoplasma capsulatum HCBG_03270 N
CIMG_12544 Coccidioides immitis CIMG_12544 N
EURHEDRAFT_416650 Aspergillus ruber EURHEDRAFT_416650 N
EPUS_08503 Endocarpon pusillum EPUS_08503 N
DOTSEDRAFT_68933 Dothistroma septosporum DOTSEDRAFT_68933 N
COCVIDRAFT_109622 Bipolaris victoriae COCVIDRAFT_109622 N
COCMIDRAFT_24616 Bipolaris oryzae COCMIDRAFT_24616 N
COCCADRAFT_29955 Bipolaris zeicola COCCADRAFT_29955 N
COCC4DRAFT_20703 Bipolaris maydis COCC4DRAFT_20703 N