RUNX3 (Oryctolagus cuniculus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSOCUG00000017751 T319442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		1.000 1.000
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		1.000 1.000
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		1.000 1.000
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		1.000 1.000
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		1.000 1.000
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		1.000 1.000
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		1.000 1.000
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		1.000 1.000
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		1.000 1.000
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		1.000 1.000
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		1.000 1.000
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		1.000 1.000
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.946 0.946
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.946 0.946
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.946 0.946
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.946 0.946
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.946 0.946
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.946 0.946
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.946 0.946
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.946 0.946
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.946 0.946
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.946 0.946
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.946 0.946
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.946 0.946
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.931 0.931
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.931 0.931
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.931 0.931
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.931 0.931
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.931 0.931
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.931 0.931
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.931 0.931
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.931 0.931
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.931 0.931
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.931 0.931
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.931 0.931
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.931 0.931
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.715 0.715
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.715 0.715
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.715 0.715
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000018262 Runt 35 164

Links

Other Runt family TFs
Other Oryctolagus cuniculus TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA011439 Anopheles arabiensis AARA011439 I
AAEL005077 Aedes aegypti AAEL005077 I
SINV19778 Solenopsis invicta SINV19778 I
Cflo_00069--XP_001120971.1_APIME Camponotus floridanus Cflo_00069--XP_001120971.1_APIME I
Gfo_R001386 Geospiza fortis Gfo_R001386 I
Ocbimv22001599m.g Octopus bimaculoides Ocbimv22001599m.g I
Sakowv30004446m.g Saccoglossus kowalevskii Sakowv30004446m.g I
CLEC011277 Cimex lectularius CLEC011277 I
nfe2l2.L Xenopus laevis XB-GENE-17346208 I
nfe2 Xenopus tropicalis XB-GENE-483914 I
nfe2.S Xenopus laevis XB-GENE-865028 I
nfe2l2 Xenopus tropicalis XB-GENE-943926 I
nfe2l2.S Xenopus laevis XB-GENE-943932 I
AALB004378 Anopheles albimanus AALB004378 I
PHUM512570 Pediculus humanus PHUM512570 I
ACHR007994 Anopheles christyi ACHR007994 I
ACOM027831 Anopheles coluzzii ACOM027831 I
ACUA024394 Anopheles culicifacies ACUA024394 I
ADIR009095 Anopheles dirus ADIR009095 I
AEPI006937 Anopheles epiroticus AEPI006937 I
AFAF013318 Anopheles farauti AFAF013318 I
AFUN007089 Anopheles funestus AFUN007089 I
AMAM004080 Anopheles maculatus AMAM004080 I
AMEC019428 Anopheles melas AMEC019428 I
AMEM005044 Anopheles merus AMEM005044 I
AMIN010749 Anopheles minimus AMIN010749 I
AQUA000302 Anopheles quadriannulatus AQUA000302 I
ASTEI10188 Anopheles stephensi ASTEI10188 I
ENSONIG00000008604 Oreochromis niloticus ENSONIG00000008604 I
AAEL015467 Aedes aegypti AAEL015467 I
ACEP22936 Atta cephalotes ACEP22936 I
ADAC005491 Anopheles darlingi ADAC005491 I
AGAP005300 Anopheles gambiae AGAP005300 I
CapteG19335 Capitella teleta CapteG19335 I
DAPPUDRAFT_307821 Daphnia pulex DAPPUDRAFT_307821 I
ENSAMXG00000007122 Astyanax mexicanus ENSAMXG00000007122 I
nfe2l2b Danio rerio ENSDARG00000089697 I
NFE2L3 Equus caballus ENSECAG00000021973 I
ENSFALG00000003227 Ficedula albicollis ENSFALG00000003227 I
nfe2l2a Gasterosteus aculeatus ENSGACG00000004470 I
ENSGMOG00000004196 Gadus morhua ENSGMOG00000004196 I
ENSLACG00000013393 Latimeria chalumnae ENSLACG00000013393 I
ENSLOCG00000006972 Lepisosteus oculatus ENSLOCG00000006972 I
NV16962 Nasonia vitripennis NV16962 I
nfe2l2a Oryzias latipes ENSORLG00000017568 I
ENSPFOG00000008177 Poecilia formosa ENSPFOG00000008177 I
ENSPFOG00000014090 Poecilia formosa ENSPFOG00000014090 I
nfe2l1a Tetraodon nigroviridis ENSTNIG00000003150 I
nfe2l2a Tetraodon nigroviridis ENSTNIG00000016959 I
nfe2l1a Takifugu rubripes ENSTRUG00000010088 I
nfe2l2a Takifugu rubripes ENSTRUG00000017486 I
ENSXMAG00000000450 Xiphophorus maculatus ENSXMAG00000000450 I
ENSXMAG00000003544 Xiphophorus maculatus ENSXMAG00000003544 I
GB42329 Apis mellifera GB42329 I
L798_05755 Zootermopsis nevadensis L798_05755 I
SPU_011174 Strongylocentrotus purpuratus SPU_011174 N
SPU_008752 Strongylocentrotus purpuratus SPU_008752 N
NEMVEDRAFT_v1g127893 Nematostella vectensis NEMVEDRAFT_v1g127893 N